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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-QTL_SNP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - QTL_SNP [ View Map Set Info ]
Map Name: 6
Map Start: 0.00 cM
Map Stop: 79.15 cM
Features by Type:
2 QTL
14 SNP
16 Total

Map Features

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Items 1 to 16 of 16.
Cowpea - QTL_SNP - 6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
100SDWTQTLIII QTL 5.78 - 11.45 No other positions
PODWTQTLIII QTL 5.78 - 11.45 No other positions
1_0323 SNP 0.00 No other positions
1_0690 SNP 5.78 No other positions
1_0074 SNP 11.45 No other positions
1_0830 SNP 21.89 No other positions
1_0660 SNP 24.44 No other positions
1_0290 SNP 28.96 No other positions
1_1194 SNP 32.93 No other positions
1_0437 SNP 37.99 No other positions
1_0706 SNP 40.17 No other positions
1_1042 SNP 43.08 No other positions
1_0123 SNP 50.18 No other positions
1_0514 SNP 56.68 No other positions
1_0171 SNP 65.33 No other positions
1_1007 SNP 69.38 No other positions