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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Vadez et al. Salt tolerance
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG8
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
RAPD
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Vadez et al. 2012 ICCV2 x JG62 [ View Map Set Info ]
Map Name: LG8
Map Start: 0.00 cM
Map Stop: 22.60 cM
Features by Type:
4 RAPD
2 SSR
6 Total

Map Features

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Items 1 to 6 of 6.
Chickpea - Vadez et al. 2012 ICCV2 x JG62 - LG8
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TR26s SSR 0.00 Chickpea - Radhika_230 loci - LG 1 TR26s SSR 127.50 (cM) Automated name-based View Maps
TR24s SSR 0.90 Chickpea - Radhika_230 loci - LG 1 TR24s SSR 132.40 (cM) Automated name-based View Maps
CA5 RAPD 0.90 Chickpea - Millan_229 loci - LG03a ca5 RAPD 17.00 (cM) Automated name-based View Maps
NO_51_2NO_Y_14_ RAPD 3.10 No other positions
NO_Z_18 RAPD 3.10 Chickpea - Millan_229 loci - LG03a NO_Z_18 RAPD 19.00 (cM) Automated name-based View Maps
SA16 RAPD 22.60 Chickpea - Millan_229 loci - LG03a SA16 RAPD 30.00 (cM) Automated name-based View Maps