CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
Chickpea-Hiremath_1328 loci
Min.
Correspondences
Align Vertically
Stack
Maps LG 1 LG01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
BES-SSR
Conserved Intron Spanning Region
DArT
EST-SSR
RAPD
SNP
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 1
Map Start: 0.00 cM
Map Stop: 382.20 cM
Features by Type:
7 AFLP
18 unknown marker
8 RAPD
9 SSR
42 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 42.       of 2 | Next
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
STMS13 SSR 0.00 Chickpea - Hiremath_1328 loci - LG01 STMS13 SSR 112.69 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 STMS13 SSR 90.80 (cM) Automated name-based View Maps
OP106-3 RAPD 15.10 No other positions
TA113 SSR 32.90 Chickpea - Varshney_352 loci - LG01 TA113 SSR 37.39 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 TA113 Winter_published 66.80 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TA113 SSR 5.18 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TA113 SSR 34.30 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA113 SSR 81.02 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA113 Winter_published 33.40 (cM) Automated name-based View Maps
ACONa unknown marker 50.60 Chickpea - Hiremath_1328 loci - LG01 ACONa SSR 82.50 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 1 ACONa unknown marker 3.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ACONa COS-SNP 26.11 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ACONa Winter_published 49.50 (cM) Automated name-based View Maps
ACONb unknown marker 60.20 Chickpea - Thudi_1291 loci - LG 1 ACONb Winter 27.69 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 1 ACONb unknown marker 11.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ACONb Winter_published 70.30 (cM) Automated name-based View Maps
OPD03-3 RAPD 66.00 No other positions
OPG09-1 RAPD 73.60 No other positions
OPQ13-2 RAPD 83.30 No other positions
ISSR8481 unknown marker 91.40 Chickpea - Gujaria_300 loci - LG01 ISSR8481 Winter 63.30 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ISSR8481 76.11 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ISSR8481 Winter 29.58 (cM) Automated name-based View Maps
ISSR8841 unknown marker 102.60 Chickpea - Thudi_1291 loci - LG 1 ISSR8841 Winter 38.64 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 ISSR8841 Winter 54.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ISSR8841 70.79 (cM) Automated name-based View Maps
ECAMCAT10 AFLP 109.70 Chickpea - Millan_555 loci - LG 1 ECAMCAT10 AFLP 5.00 (cM) Automated name-based View Maps
TR43 SSR 120.20 Chickpea - Millan_229 loci - LG01 TR43 RAPD 22.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TR43 SSR 108.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TR43 SSR 50.45 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 2 TR43 SSR 18.57 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TR43 SSR 63.95 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG1 TR43 SSR 5.60 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TR43 SSR 41.77 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 TR43 SSR 50.10 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TR43 Winter_published 122.70 (cM) Automated name-based View Maps
TA1 SSR 123.10 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG01 TA1 SSR 34.59 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 TA1 Winter 47.50 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA1 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG01 TA1 SSR 75.83 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TA1 Winter 45.94 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TA1 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA1 SSR 62.91 (cM) Automated name-based View Maps
TA8 SSR 123.10 Chickpea - Gujaria_300 loci - LG01 TA8 Winter 47.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA8 SSR 62.72 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA8 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TA8 Winter 47.53 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 TA8 SSR 65.90 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TA8 SSR 42.57 (cM) Automated name-based View Maps
REPT3 unknown marker 127.20 No other positions
AF0 unknown marker 131.60 No other positions
ISSR858 unknown marker 133.40 Chickpea - Hiremath_1328 loci - LG01 ISSR858 61.36 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ISSR858 Winter 50.93 (cM) Automated name-based View Maps
OPU17-3 RAPD 133.40 No other positions
R260-9-2 unknown marker 133.40 No other positions
OPC11-3 RAPD 139.50 No other positions
R260-9-3 unknown marker 159.80 No other positions
TA203 SSR 176.70 Chickpea - Millan_229 loci - LG01 TA203 RAPD 27.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 TA203 SSR 71.04 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA203 Winter_published 186.90 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TA203 SSR 36.55 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA203 SSR 40.74 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG1 TA203 SSR 4.90 (cM) Automated name-based View Maps
ISSR888 unknown marker 194.40 Chickpea - Gujaria_300 loci - LG01 ISSR888 Winter 66.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ISSR888 80.62 (cM) Automated name-based View Maps
ISSR8552 unknown marker 201.90 Chickpea - Hiremath_1328 loci - LG01 ISSR8552 74.09 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ISSR8552 Winter 35.65 (cM) Automated name-based View Maps
IGR3R6 unknown marker 220.40 No other positions