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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Pigeonpea-ICPA 2043 x ICPR 3467
 Pigeonpea-ICPA 2039 x ICPR 2447
(Reference Set)
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Correspondences
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Maps LG11 LG11
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pigeonpea - Bohra et al. 2011_ICPA 2039 x ICPR 2447 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 70.83 cM
Features by Type:
6 SSR
6 Total

Map Features

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Items 1 to 6 of 6.
Pigeonpea - Bohra et al. 2011_ICPA 2039 x ICPR 2447 - LG11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CcM0381 SSR 0.00 Pigeonpea - Consensus - LG11 CcM0381 SSR 0.00 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG11 CcM0381 SSR 0.00 (cM) Automated name-based View Maps
CcM0047 SSR 35.43 Pigeonpea - Consensus - LG11 CcM0047 SSR 44.71 (cM) Automated name-based View Maps
CcM2332 SSR 41.75 Pigeonpea - ICPA 2043 x ICPR 3467 - LG11 CcM2332 SSR 69.31 (cM) Automated name-based View Maps
Pigeonpea - Consensus - LG11 CcM2332 SSR 51.11 (cM) Automated name-based View Maps
CcM1713 SSR 47.70 Pigeonpea - Consensus - LG11 CcM1713 SSR 57.00 (cM) Automated name-based View Maps
CcM2735 SSR 52.76 Pigeonpea - Consensus - LG11 CcM2735 SSR 62.07 (cM) Automated name-based View Maps
CcM2871 SSR 70.83 Pigeonpea - ICPA 2043 x ICPR 2671 - LG11 CcM2871 SSR 45.45 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG11 CcM2871 SSR 99.22 (cM) Automated name-based View Maps
Pigeonpea - Consensus - LG11 CcM2871 SSR 80.02 (cM) Automated name-based View Maps