CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_b10
 Groundnut-RIL-7
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-7_LG7 RIL-7_LG07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-7 [ View Map Set Info ]
Map Name: RIL-7_LG07
Map Start: 0.00 cM
Map Stop: 42.70 cM
Features by Type:
8 SSR
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Groundnut - RIL-7 - RIL-7_LG07
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq3E10-2 SSR 0.00 Groundnut - Ref. consensus genetic map - b10 seq3E10-2 SSR 75.68 (cM) Automated name-based, Automated name-based View Maps
EE-16 SSR 6.30 No other positions
GA131 SSR 11.60 Groundnut - combined_corresponding_a10 - RIL-8_LG7 GA131 SSR 15.00 (cM) Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG07 GA131 SSR 20.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG07 GA131 SSR 27.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GA131 SSR 84.57 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 GA131 SSR 62.13 (cM) Automated name-based, Automated name-based View Maps
TC3E05 SSR 22.70 Groundnut - RIL-4 - RIL-4_LG12 TC3E05 SSR 19.40 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 TC3E05 SSR 241.57 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG04 TC3E05 SSR 181.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG04 TC3E05 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 TC3E05 SSR 47.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG12 TC3E05 SSR 19.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG12 TC3E05 SSR 9.72 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GA156 SSR 25.40 Groundnut - RIL-6 - RIL-6_LG07 GA156 SSR 9.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 GA156 SSR 27.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 GA156 SSR 44.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 GA156 SSR 11.40 (cM) Automated name-based View Maps
AC2B03 SSR 29.60 Groundnut - Ref. consensus genetic map - b10 AC2B03 SSR 44.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - BC-1_a10 AC2B03 SSR 9.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-8_LG7 AC2B03 SSR 5.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 AC2B03 SSR 76.37 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 AC2B03 SSR 13.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG07 AC2B03 SSR 8.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG07 AC2B03 SSR 15.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
TC11A02 SSR 35.60 Groundnut - RIL-6 - RIL-6_LG07 TC11A02 SSR 19.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 TC11A02 SSR 12.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 TC11A02 SSR 29.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 TC11A02 SSR 42.55 (cM) Automated name-based, Automated name-based View Maps
seq7H6 SSR 42.70 No other positions