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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_b02
Groundnut-RIL-10
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-10_LG12 RIL-10_LG25
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG25
Map Start: 0.00 cM
Map Stop: 15.70 cM
Features by Type:
2 SSR
2 Total

Map Features

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Items 1 to 2 of 2.
Groundnut - RIL-10 - RIL-10_LG25
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
IPAHM167 SSR 0.00 Groundnut - Ref. consensus genetic map - a05 IPAHM167 SSR 215.93 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 IPAHM167 SSR 233.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-3_LG5 IPAHM167 SSR 57.00 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG12 IPAHM167 SSR 39.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-10_LG12 IPAHM167 SSR 11.60 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG05 IPAHM167 SSR 57.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b02 IPAHM167 SSR 102.30 (cM) Automated name-based, Automated name-based View Maps
GM1555 SSR 15.70 Groundnut - Consensus_Biotic - LG04 GM1555 SSR 31.83 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 GM1555 SSR 35.80 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG04 GM1555 SSR 47.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 GM1555 SSR 74.81 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 GM1555 SSR 35.80 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-4_LG4 GM1555 SSR 47.90 (cM) Automated name-based View Maps