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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 3
Map Start: 0.00 cM
Map Stop: 92.43 cM
Features by Type:
204 SNP
204 Total

Map Features

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Items 1 to 25 of 204.       of 9 | Next
Cowpea - Cowpea SNP Version 4 - 3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0539 SNP 0.00 No other positions
1_0655 SNP 0.74 No other positions
1_0175 SNP 1.49 No other positions
1_0436 SNP 2.62 No other positions
1_0143 SNP 3.39 No other positions
1_1144 SNP 3.53 No other positions
1_1065 SNP 4.31 No other positions
1_1299 SNP 4.56 No other positions
1_1073 SNP 5.33 No other positions
1_0180 SNP 6.15 No other positions
1_0946 SNP 6.23 No other positions
1_0199 SNP 7.16 No other positions
1_0458 SNP 8.01 No other positions
1_0683 SNP 8.01 No other positions
1_0764 SNP 8.01 No other positions
1_0183 SNP 8.36 No other positions
1_1251 SNP 8.83 No other positions
1_0071 SNP 9.28 No other positions
1_0483 SNP 9.28 No other positions
1_0080 SNP 9.91 No other positions
1_0447 SNP 10.22 No other positions
1_0146 SNP 10.46 No other positions
1_0147 SNP 10.82 No other positions
1_0853 SNP 10.82 No other positions
1_0234 SNP 11.06 No other positions