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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 4
Map Start: 0.00 cM
Map Stop: 45.67 cM
Features by Type:
83 SNP
83 Total

Map Features

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Items 1 to 25 of 83.       of 4 | Next
Cowpea - Cowpea SNP Version 4 - 4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0364 SNP 0.00 No other positions
1_1034 SNP 0.05 No other positions
1_0206 SNP 0.13 No other positions
1_0572 SNP 0.30 No other positions
1_0052 SNP 0.72 No other positions
1_0888 SNP 0.72 No other positions
1_0054 SNP 0.92 No other positions
1_0854 SNP 2.08 No other positions
1_0188 SNP 2.16 No other positions
1_0342 SNP 2.16 No other positions
1_0456 SNP 2.16 No other positions
1_0803 SNP 2.16 No other positions
1_0973 SNP 2.16 No other positions
1_1032 SNP 2.16 No other positions
1_1147 SNP 2.77 No other positions
1_0397 SNP 4.89 No other positions
1_0969 SNP 5.19 No other positions
1_0314 SNP 5.45 No other positions
1_0890 SNP 5.45 No other positions
1_0321 SNP 5.57 No other positions
1_0976 SNP 5.82 No other positions
1_0672 SNP 6.12 No other positions
1_0673 SNP 6.30 No other positions
1_0190 SNP 6.83 No other positions
1_0502 SNP 10.27 No other positions