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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 5
Map Start: 0.00 cM
Map Stop: 58.17 cM
Features by Type:
93 SNP
93 Total

Map Features

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Items 1 to 25 of 93.       of 4 | Next
Cowpea - Cowpea SNP Version 4 - 5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_1003 SNP 0.00 No other positions
1_0684 SNP 2.98 No other positions
1_0045 SNP 3.16 No other positions
1_0309 SNP 4.29 No other positions
1_0049 SNP 4.66 No other positions
1_1132 SNP 4.82 No other positions
1_0442 SNP 5.80 No other positions
1_1366 SNP 5.80 No other positions
1_1232 SNP 6.37 No other positions
1_0605 SNP 7.34 No other positions
1_0095 SNP 12.61 No other positions
1_0335 SNP 12.61 No other positions
1_0806 SNP 12.97 No other positions
1_0292 SNP 13.43 No other positions
1_0789 SNP 13.98 No other positions
1_0271 SNP 14.31 No other positions
1_0507 SNP 15.13 No other positions
1_0979 SNP 15.13 No other positions
1_1001 SNP 16.08 No other positions
1_0478 SNP 17.04 No other positions
1_0624 SNP 17.04 No other positions
1_0819 SNP 18.50 No other positions
1_0173 SNP 18.57 No other positions
1_0452 SNP 20.70 No other positions
1_0557 SNP 21.57 No other positions