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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 6
Map Start: 0.00 cM
Map Stop: 79.15 cM
Features by Type:
109 SNP
109 Total

Map Features

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Items 1 to 25 of 109.       of 5 | Next
Cowpea - Cowpea SNP Version 4 - 6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0962 SNP 0.00 No other positions
1_0172 SNP 3.19 No other positions
1_0174 SNP 3.19 No other positions
1_0690 SNP 3.82 No other positions
1_0751 SNP 3.82 No other positions
1_0908 SNP 3.82 No other positions
1_1333 SNP 3.82 No other positions
1_1403 SNP 4.55 No other positions
1_0432 SNP 7.19 No other positions
1_0074 SNP 7.38 No other positions
1_1381 SNP 8.83 No other positions
1_0895 SNP 9.05 No other positions
1_1077 SNP 9.05 No other positions
1_0660 SNP 10.98 No other positions
1_0732 SNP 19.22 No other positions
1_0332 SNP 19.71 No other positions
1_0066 SNP 21.08 No other positions
1_1226 SNP 22.12 No other positions
1_1515 SNP 22.30 No other positions
1_0084 SNP 24.06 No other positions
1_0825 SNP 24.22 No other positions
1_0485 SNP 24.26 No other positions
1_0024 SNP 24.36 No other positions
1_0823 SNP 24.36 No other positions
1_1082 SNP 24.36 No other positions