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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 7
Map Start: 0.00 cM
Map Stop: 48.06 cM
Features by Type:
82 SNP
82 Total

Map Features

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Items 1 to 25 of 82.       of 4 | Next
Cowpea - Cowpea SNP Version 4 - 7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0824 SNP 40.35 No other positions
1_0056 SNP 40.62 No other positions
1_0305 SNP 41.58 No other positions
1_0944 SNP 42.33 No other positions
1_1249 SNP 45.05 No other positions
1_1465 SNP 45.72 No other positions
1_0039 SNP 46.35 No other positions
1_0248 SNP 46.51 No other positions
1_0016 SNP 48.06 No other positions
1_1135 SNP 48.06 No other positions
1_0576 SNP 37.27 No other positions
1_0559 SNP 37.52 No other positions
1_1315 SNP 33.28 No other positions
1_0864 SNP 35.29 No other positions
1_1113 SNP 35.29 No other positions
1_0294 SNP 36.22 No other positions
1_0370 SNP 0.00 No other positions
1_0881 SNP 3.14 No other positions
1_1521 SNP 4.09 No other positions
1_0261 SNP 4.28 No other positions
1_0763 SNP 4.28 No other positions
1_1418 SNP 4.58 No other positions
1_1014 SNP 5.61 No other positions
1_0006 SNP 5.88 No other positions
1_1266 SNP 5.88 No other positions