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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-Version 4
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - Cowpea SNP Version 4 [ View Map Set Info ]
Map Name: 11
Map Start: 0.00 cM
Map Stop: 46.01 cM
Features by Type:
73 SNP
73 Total

Map Features

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Items 1 to 25 of 73.       of 3 | Next
Cowpea - Cowpea SNP Version 4 - 11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0422 SNP 40.69 No other positions
1_0816 SNP 40.69 No other positions
1_1180 SNP 40.69 No other positions
1_0553 SNP 41.74 No other positions
1_0787 SNP 46.01 No other positions
1_0940 SNP 0.00 No other positions
1_0886 SNP 2.93 No other positions
1_0702 SNP 2.94 No other positions
1_1052 SNP 3.23 No other positions
1_0603 SNP 4.60 No other positions
1_0905 SNP 5.71 No other positions
1_0134 SNP 6.72 No other positions
1_1164 SNP 7.83 No other positions
1_0531 SNP 7.96 No other positions
1_0805 SNP 7.96 No other positions
1_0894 SNP 8.16 No other positions
1_0125 SNP 8.60 No other positions
1_0757 SNP 10.87 No other positions
1_1338 SNP 11.69 No other positions
1_0414 SNP 11.94 No other positions
1_1390 SNP 12.43 No other positions
1_0970 SNP 12.63 No other positions
1_0961 SNP 13.25 No other positions
1_0028 SNP 15.94 No other positions
1_0802 SNP 17.29 No other positions