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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cowpea-QTL_SNP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
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Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cowpea - QTL_SNP [ View Map Set Info ]
Map Name: 3
Map Start: 0.00 cM
Map Stop: 143.08 cM
Features by Type:
1 QTL
25 SNP
26 Total

Map Features

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Items 1 to 25 of 26.       of 2 | Next
Cowpea - QTL_SNP - 3
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
100SDWTQTLVII QTL 124.99 - 128.90 No other positions
1_0853 SNP 0.00 No other positions
1_0447 SNP 0.73 No other positions
1_0146 SNP 3.24 No other positions
1_0937 SNP 8.99 No other positions
1_0031 SNP 15.53 No other positions
1_1455 SNP 18.81 No other positions
1_1072 SNP 19.70 No other positions
1_0761 SNP 36.87 No other positions
1_1170 SNP 41.22 No other positions
1_0959 SNP 58.58 No other positions
1_0831 SNP 63.49 No other positions
1_0444 SNP 63.87 No other positions
1_1027 SNP 63.87 No other positions
1_0604 SNP 66.39 No other positions
1_0352 SNP 67.64 No other positions
1_0964 SNP 84.85 No other positions
1_0900 SNP 89.95 No other positions
1_0812 SNP 93.53 No other positions
1_1231 SNP 112.88 No other positions
1_0990 SNP 114.01 No other positions
1_0878 SNP 124.99 No other positions
1_0303 SNP 128.90 No other positions
1_0496 SNP 132.73 No other positions
1_1073 SNP 139.72 No other positions