CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Chickpea_QTL_SNP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Chickpea_QTL_SNP [ View Map Set Info ]
Map Name: 1
Map Start: 0.00 cM
Map Stop: 37.95 cM
Features by Type:
12 QTL
9 SSR
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Chickpea - Chickpea_QTL_SNP - 1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TS35 SSR 0.00 Chickpea - Nayak_521 loci - LG 5 Ts35 Winter_published 58.10 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TS35 SSR 63.20 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TS35 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 Ts35 SSR 47.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 Ts35 SSR 43.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TS35 SSR 49.30 (cM) Automated name-based View Maps
TA39 SSR 2.68 Chickpea - Hiremath_1328 loci - LG05 TA39 SSR 85.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TA39 Winter 93.08 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TA39 SSR 203.20 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TA39 Winter_published 173.50 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 TA39 RAPD 36.00 (cM) Automated name-based View Maps
CaM0038 SSR 4.01 Chickpea - 1147 Transcript map(Seq-clone) - LG05 CaM0038 SSR 40.83 (cM) Automated name-based View Maps
Chickpea - Pushpavalli_56_loci - CaLG05 CaM0038 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG05 CaM0038 SSR 23.24 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 CaM0038 SSR 14.40 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG05 CaM0038 SSR 16.07 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 CaM0038 BES-SSR 99.97 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 CaM0038 BES-SSR 89.42 (cM) Automated name-based View Maps
CaM0436 SSR 5.46 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 CaM0436 SSR 16.00 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 CaM0436 SSR 53.88 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 CaM0436 BES-SSR 63.63 (cM) Automated name-based View Maps
CaM1416 SSR 7.62 No other positions
CaM0848 SSR 8.46 Chickpea - Varshney_352 loci - LG05 CaM0848 SSR 15.12 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 CaM0848 SSR 19.24 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG05 CaM0848 SSR 13.17 (cM) Automated name-based View Maps
TS43 SSR 12.89 Chickpea - Radhika_230 loci - LG 1 TS43 SSR 50.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TS43 SSR 79.85 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TS43 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TS43 SSR 86.96 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TS43 Winter_published 147.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TS43 SSR 171.10 (cM) Automated name-based View Maps
CaM0111 SSR 19.34 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 CaM0111 SSR 37.93 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 CaM0111 SSR 37.57 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG07 CaM0111 SSR 17.59 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 CaM0111 SSR 58.35 (cM) Automated name-based View Maps
TR26 SSR 37.95 Chickpea - Winter_354 loci - LG 3 TR26 SSR 208.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 TR26 SSR 79.62 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR26 SSR 67.72 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TR26 AFLP 86.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR26 Winter_published 206.50 (cM) Automated name-based View Maps
PlantHt_PAT_IR_JG130 QTL 7.62 - 12.89 No other positions
Biomass_PAT_IR_JG130_I QTL 2.68 - 5.46 No other positions
Biomass_PAT_IR_JG130_II QTL 19.34 - 37.95 No other positions
SeedYldGP_PAT_IR_JG130 QTL 2.68 - 5.46 No other positions
SeedYldKgH_PAT_IR_JG130 QTL 2.68 - 5.46 No other positions
DaysFFlower_PAT_RF_JG130_II QTL 8.46 - 19.34 No other positions
DaysMature_PAT_RF_JG130 QTL 2.68 - 8.46 No other positions
Biomass_PAT_RF_JG130_I QTL 2.68 - 7.62 No other positions
SeedYldGP_PAT_RF_JG130 QTL 2.68 - 7.62 No other positions
HI_PAT_RF_JG130_I QTL 19.34 - 37.95 No other positions
HI_PAT_RF_JG130_III QTL 19.34 - 37.95 No other positions
SeedYldKgH_PAT_RF_JG130 QTL 2.68 - 7.62 No other positions