CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link

**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Chickpea_QTL_SNP
(Reference Set)
Align Vertically
Maps 2
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Always Display
Show Labels: None Landmarks All
Collapse Overlapping
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Greater Than
Automated name-based
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Number of
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Chickpea_QTL_SNP [ View Map Set Info ]
Map Name: 2
Map Start: 0.00 cM
Map Stop: 53.94 cM
Features by Type:
7 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 7 of 7.
Chickpea - Chickpea_QTL_SNP - 2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
H3D05 SSR 0.00 No other positions
CaM0144 SSR 12.64 Chickpea - Varshney_241 loci - LG01 CaM0144 SSR 73.98 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG01 CaM0144 SSR 45.33 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 CaM0144 SSR 74.11 (cM) Automated name-based View Maps
TR43 SSR 18.57 Chickpea - Hiremath_1328 loci - LG01 TR43 SSR 63.95 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TR43 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TR43 SSR 108.50 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 1 TR43 SSR 120.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TR43 SSR 50.45 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG1 TR43 SSR 5.60 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TR43 SSR 41.77 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG01 TR43 SSR 50.10 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG01 TR43 RAPD 22.00 (cM) Automated name-based View Maps
TA122 SSR 33.96 Chickpea - Varshney_168 loci - LG01 TA122 SSR 10.91 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 TA122 SSR 44.58 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 1 TA122 Gene Sequence 27.00 (cM) Automated name-based View Maps
CaSTMs21 SSR 53.94 No other positions
SeedMass_PAT_IR_JG130 QTL 33.96 - 53.94 No other positions
Biomass_PAT_RF_JG130_II QTL 18.57 - 33.96 No other positions