CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Varshney_168 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
DArT
EST-SSR
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 [ View Map Set Info ]
Map Name: LG07
Map Start: 0.00 cM
Map Stop: 104.92 cM
Features by Type:
3 DArT
4 EST-SSR
17 SSR
24 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 24 of 24.
Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 - LG07
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
H1P17 SSR 0.00 Chickpea - Varshney_352 loci - LG07 H1P17 SSR 73.02 (cM) Automated name-based View Maps
ICCeM0050 EST-SSR 4.98 Chickpea - Varshney_241 loci - LG03 ICCeM0050 EST-SSR 21.81 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 ICCeM0050 EST-SSR 44.71 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 ICCeM0050 EST-SSR 51.54 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 ICCeM0050 EST-SSR 41.18 (cM) Automated name-based View Maps
ICCeM0017 EST-SSR 6.34 Chickpea - Varshney_352 loci - LG07 ICCeM0017 EST-SSR 52.95 (cM) Automated name-based View Maps
CaM2131 SSR 11.75 Chickpea - Varshney_241 loci - LG07 CaM2131 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 CaM2131 SSR 0.00 (cM) Automated name-based View Maps
CaM2094 SSR 12.14 Chickpea - 1147 Transcript map(Seq-clone) - LG07 CaM2094 SSR 45.71 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 CaM2094 SSR 60.25 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 CaM2094 BES-SSR 7.13 (cM) Automated name-based View Maps
H1F24 SSR 12.40 Chickpea - Varshney_352 loci - LG07 H1F24 SSR 59.79 (cM) Automated name-based View Maps
CaM0443 SSR 13.20 Chickpea - Varshney_241 loci - LG07 CaM0443 SSR 36.71 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 CaM0443 SSR 59.32 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 CaM0443 SSR 38.98 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 CaM0443 BES-SSR 38.00 (cM) Automated name-based View Maps
TA114 SSR 15.71 Chickpea - Vadez et al. Salt tolerance - LG5 TA114 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 TA114 SSR 62.00 (cM) Automated name-based View Maps
TA78 SSR 16.58 Chickpea - Radhika_230 loci - LG 5 TA78 SSR 46.40 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TA78 SSR 48.29 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 5 TA78 SSR 61.80 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG5 TA78 SSR 29.80 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 7 TA78 Winter_published 244.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TA78 Winter 39.28 (cM) Automated name-based View Maps
TAA58 SSR 16.59 Chickpea - Nayak_521 loci - LG 7 TAA58 Winter_published 268.20 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 5 TAA58 SSR 82.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG07 TAA58 SSR 33.98 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TAA58 Winter 45.59 (cM) Automated name-based View Maps
CaM0111 SSR 17.59 Chickpea - Chickpea_QTL_SNP - 1 CaM0111 SSR 19.34 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 CaM0111 SSR 58.35 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 CaM0111 SSR 37.93 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 CaM0111 SSR 37.57 (cM) Automated name-based View Maps
CaM0906 SSR 17.94 Chickpea - Varshney_352 loci - LG07 CaM0906 SSR 63.18 (cM) Automated name-based View Maps
Chickpea - Pushpavalli_56_loci - CaLG07 CaM0906 SSR 0.90 (cM) Automated name-based View Maps
STMS25 SSR 19.01 Chickpea - Nayak_521 loci - LG 5 STMS25 Winter_published 305.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 STMS25 Winter 5.90 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 STMS25 SSR 64.38 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG07 STMS25 SSR 62.49 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 5 STMS25 SSR 36.10 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 STMS25 SSR 42.78 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 15 STMS25 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 STMS25 SSR 32.15 (cM) Automated name-based View Maps
CaM1687 SSR 20.29 Chickpea - Varshney_352 loci - LG07 CaM1687 SSR 66.62 (cM) Automated name-based View Maps
TA28 SSR 24.99 Chickpea - Vadez et al. Salt tolerance - LG5 TA28 SSR 15.10 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 5 TA28 SSR 72.80 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 5 TA28 SSR 12.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TA28 Winter 46.32 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 7 TA28 Winter_published 268.20 (cM) Automated name-based View Maps
NCPGR130 SSR 30.95 Chickpea - Varshney_352 loci - LG07 NCPGR130 SSR 84.13 (cM) Automated name-based View Maps
TA44 SSR 41.46 Chickpea - Varshney_352 loci - LG07 TA44 SSR 88.02 (cM) Automated name-based View Maps
TA117 SSR 45.78 Chickpea - Varshney_352 loci - LG07 TA117 SSR 91.02 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 5 TA117 SSR 21.10 (cM) Automated name-based View Maps
ICCeM0035 EST-SSR 62.90 Chickpea - Varshney_352 loci - LG07 ICCeM0035 EST-SSR 112.54 (cM) Automated name-based View Maps
ICCeM0033 EST-SSR 74.40 Chickpea - Varshney_352 loci - LG07 ICCeM0033 EST-SSR 124.15 (cM) Automated name-based View Maps
cpPb-677304 DArT 78.15 Chickpea - Varshney_352 loci - LG07 cpPb-677304 DArT 127.89 (cM) Automated name-based View Maps
cpPb-676765 DArT 78.19 Chickpea - Varshney_352 loci - LG07 cpPb-676765 DArT 127.94 (cM) Automated name-based View Maps
cpPb-679660 DArT 78.21 Chickpea - Varshney_352 loci - LG07 cpPb-679660 DArT 127.96 (cM) Automated name-based View Maps
NCPGR249 SSR 104.92 Chickpea - Varshney_352 loci - LG07 NCPGR249 SSR 156.00 (cM) Automated name-based View Maps