CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Varshney_168 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG03
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
DArT
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 [ View Map Set Info ]
Map Name: LG03
Map Start: 0.00 cM
Map Stop: 69.44 cM
Features by Type:
2 DArT
20 SSR
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 - LG03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TR31 SSR 0.00 Chickpea - Thudi_1291 loci - LG 3 TR31 SSR 21.73 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 TR31 SSR 70.77 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TR31 SSR 84.90 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 TR31 SSR 4.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 TR31 SSR 37.70 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TR31 RAPD 47.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR31 Winter_published 60.40 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR31 SSR 96.20 (cM) Automated name-based View Maps
cpPb-490100 DArT 0.15 Chickpea - Varshney_352 loci - LG03 cpPb-490100 DArT 68.20 (cM) Automated name-based View Maps
TAA169 SSR 15.81 Chickpea - Radhika_230 loci - LG 1 TAA169 SSR 83.10 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 TAA169 SSR 52.34 (cM) Automated name-based View Maps
STMS10 SSR 18.38 Chickpea - Varshney_352 loci - LG03 STMS10 SSR 49.78 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 STMS10 Winter 22.49 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 STMS10 SSR 39.48 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 STMS10 SSR 88.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 STMS10 SSR 58.50 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 STMS10 SSR 70.70 (cM) Automated name-based View Maps
CaM0658 SSR 19.99 Chickpea - Thudi_1291 loci - LG 3 CaM0658 BES-SSR 30.69 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 9 CaM0658 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 CaM0658 SSR 48.11 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG03 CaM0658 SSR 23.91 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 CaM0658 BES-SSR 46.56 (cM) Automated name-based View Maps
CISR105 SSR 20.22 Chickpea - Varshney_352 loci - LG03 CISR105 Conserved Intron Spanning Region 47.53 (cM) Automated name-based View Maps
TS5 SSR 22.88 Chickpea - Varshney_352 loci - LG03 TS5 SSR 44.64 (cM) Automated name-based View Maps
CaM2174 SSR 24.03 Chickpea - Varshney_352 loci - LG03 CaM2174 SSR 43.04 (cM) Automated name-based View Maps
Chickpea - Pushpavalli_56_loci - CaLG03 CaM2174 SSR 0.20 (cM) Automated name-based View Maps
TR13 SSR 24.62 Chickpea - Varshney_352 loci - LG03 TR13 SSR 43.46 (cM) Automated name-based View Maps
CaM2102 SSR 25.21 Chickpea - Varshney_352 loci - LG03 CaM2102 SSR 40.90 (cM) Automated name-based View Maps
CaM2095 SSR 27.70 Chickpea - Varshney_352 loci - LG03 CaM2095 SSR 40.31 (cM) Automated name-based View Maps
TS29 SSR 29.48 Chickpea - Varshney_352 loci - LG03 TS29 SSR 38.27 (cM) Automated name-based View Maps
CaM1376 SSR 30.27 Chickpea - Varshney_352 loci - LG03 CaM1376 SSR 42.22 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 CaM1376 SSR 25.36 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 CaM1376 SSR 69.20 (cM) Automated name-based View Maps
ICCM0178 SSR 30.81 Chickpea - Hiremath_1328 loci - LG03 ICCM0178 44.24 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 ICCM0178 SSR 37.35 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 ICCM0178 SSR 13.30 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 ICCM0178 SSR 47.20 (cM) Automated name-based View Maps
Chickpea - Pushpavalli_56_loci - CaLG03 ICCM0178 SSR 0.00 (cM) Automated name-based View Maps
CaM1767 SSR 31.16 Chickpea - Varshney_352 loci - LG03 CaM1767 SSR 36.81 (cM) Automated name-based View Maps
H3F08 SSR 31.76 Chickpea - Varshney_352 loci - LG03 H3F08 SSR 36.42 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 H3F08 SSR 18.03 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 H3F08 SSR 59.88 (cM) Automated name-based View Maps
H1F14 SSR 32.07 Chickpea - Nayak_521 loci - LG 3 H1F14 SSR 47.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 H1F14 SSR 30.82 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 9 H1F14 SSR 5.05 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 H1F14 SSR 36.10 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 H1F14 SSR 13.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 H1F14 46.71 (cM) Automated name-based View Maps
CaM1024 SSR 33.02 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 CaM1024 SSR 54.86 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 CaM1024 SSR 13.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 CaM1024 SSR 32.81 (cM) Automated name-based View Maps
CaM1753 SSR 39.16 Chickpea - Varshney_352 loci - LG03 CaM1753 SSR 28.59 (cM) Automated name-based View Maps
cpPb-677529 DArT 57.81 Chickpea - Varshney_352 loci - LG03 cpPb-677529 DArT 9.95 (cM) Automated name-based View Maps
CaM1117 SSR 65.66 Chickpea - Varshney_352 loci - LG03 CaM1117 SSR 2.09 (cM) Automated name-based View Maps
CaM0499 SSR 69.44 Chickpea - Varshney_352 loci - LG03 CaM0499 SSR 0.00 (cM) Automated name-based View Maps