CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Varshney_168 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 [ View Map Set Info ]
Map Name: LG02
Map Start: 0.00 cM
Map Stop: 66.61 cM
Features by Type:
16 SSR
16 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 16 of 16.
Chickpea - Varshney_168 loci_ICC 283 x ICC 8261 - LG02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GA20 SSR 0.00 Chickpea - Millan_555 loci - LG 2 GA20 unknown marker 1.00 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 GA20 SSR 92.16 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 GA20 SSR 4.74 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 GA20 SSR 78.50 (cM) Automated name-based View Maps
GA16 SSR 0.90 Chickpea - Varshney_352 loci - LG02 GA16 SSR 14.92 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 GA16 unknown marker 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 GA16 SSR 60.33 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 GA16 SSR 67.73 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 GA16 Winter_published 0.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 GA16 SSR 29.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 GA16 Winter 27.74 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 2 GA16 SSR 69.50 (cM) Automated name-based View Maps
CaM1908 SSR 24.50 Chickpea - Varshney_352 loci - LG02 CaM1908 SSR 34.08 (cM) Automated name-based View Maps
CaM1907 SSR 30.08 Chickpea - Varshney_352 loci - LG02 CaM1907 SSR 39.59 (cM) Automated name-based View Maps
H1J04 SSR 35.41 Chickpea - Varshney_352 loci - LG02 H1J04 SSR 46.21 (cM) Automated name-based View Maps
H1H011 SSR 36.84 Chickpea - Varshney_241 loci - LG02 H1H011 SSR 34.20 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 H1H011 SSR 43.59 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 H1H011 SSR 52.26 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 H1H011 50.69 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 H1H011 SSR 34.79 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 H1H011 SSR 126.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 H1H011 SSR 57.30 (cM) Automated name-based View Maps
H1P092 SSR 37.03 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 H1P092 SSR 34.67 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 H1P092 SSR 44.48 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 H1P092 SSR 52.14 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 H1P092 SSR 126.40 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 H1P092 SSR 59.20 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 H1P092 51.00 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 H1P092 SSR 34.48 (cM) Automated name-based View Maps
CaM0293 SSR 37.51 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 CaM0293 SSR 20.48 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 CaM0293 SSR 50.81 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 CaM0293 SSR 17.34 (cM) Automated name-based View Maps
CaM0861 SSR 40.74 Chickpea - Varshney_241 loci - LG02 CaM0861 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 CaM0861 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 CaM0861 SSR 54.53 (cM) Automated name-based View Maps
TA59 SSR 43.33 Chickpea - Gujaria_300 loci - LG02 TA59 Winter 62.90 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TA59 SSR 21.20 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 2 TA59 SSR 140.30 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG2 TA59 SSR 5.10 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 TA59 RAPD 30.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TA59 Winter 56.01 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TA59 Winter_published 120.10 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA59 SSR 53.12 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TA59 SSR 47.97 (cM) Automated name-based View Maps
TA206 SSR 44.51 Chickpea - Varshney_241 loci - LG02 TA206 SSR 27.92 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA206 SSR 49.07 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 TA206 SSR 29.82 (cM) Automated name-based View Maps
TA200 SSR 46.59 Chickpea - Vadez et al. Salt tolerance - LG2 TA200 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA200 SSR 54.29 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 TA200 SSR 24.26 (cM) Automated name-based View Maps
CaM0043 SSR 48.62 Chickpea - Varshney_352 loci - LG02 CaM0043 SSR 57.31 (cM) Automated name-based View Maps
TR19 SSR 48.72 Chickpea - Winter_354 loci - LG 2 TR19 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TR19 SSR 57.57 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TR19 CAPS 34.90 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TR19 SSR 30.03 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TR19 Winter_published 38.30 (cM) Automated name-based View Maps
NCPGR193 SSR 58.98 Chickpea - Varshney_352 loci - LG02 NCPGR193 SSR 67.60 (cM) Automated name-based View Maps
NCPGR117 SSR 66.61 Chickpea - Varshney_352 loci - LG02 NCPGR117 SSR 75.69 (cM) Automated name-based View Maps