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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Sorghum-Rami
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sorghum - Rami [ View Map Set Info ]
Map Name: 3
Map Start: 0.00 cM
Map Stop: 185.60 cM
Features by Type:
2 QTL
22 SSR
24 Total

Map Features

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Items 1 to 24 of 24.
Sorghum - Rami - 3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SB03001 SSR 0.00 No other positions
SB03005 SSR 8.00 No other positions
Xcup11 SSR 13.20 No other positions
SB03014 SSR 19.30 No other positions
cir287 SSR 28.60 No other positions
SB03038 SSR 48.40 No other positions
SB03048 SSR 61.70 No other positions
SB03050 SSR 62.60 No other positions
SB03064 SSR 84.70 No other positions
cir224 SSR 90.60 No other positions
SB03085 SSR 98.10 No other positions
Xtxp31 SSR 106.20 No other positions
SB03098 SSR 112.40 No other positions
SB03102 SSR 121.40 No other positions
SB03111 SSR 135.90 No other positions
Xtxp114 SSR 145.30 No other positions
SB03131 SSR 155.10 No other positions
SB03137 SSR 158.10 No other positions
cir225 SSR 159.60 No other positions
SB03149 SSR 164.40 No other positions
cir196 SSR 174.80 No other positions
Xtxp69 SSR 185.60 No other positions
ph_cir224_CZ1 QTL 90.60 No other positions
ph_C3P170_CZ1 QTL 169.60 No other positions