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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Sorghum-Rami
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sorghum - Rami [ View Map Set Info ]
Map Name: 6
Map Start: 0.00 cM
Map Stop: 166.40 cM
Features by Type:
16 SSR
16 Total

Map Features

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Items 1 to 16 of 16.
Sorghum - Rami - 6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
cir211 SSR 0.00 No other positions
SB06008 SSR 13.70 No other positions
Xtxp6 SSR 31.00 No other positions
gpsb180 SSR 45.90 No other positions
SB06046 SSR 63.90 No other positions
SB06059 SSR 86.10 No other positions
Xtxp145 SSR 96.30 No other positions
gpsb127 SSR 100.70 No other positions
gpsb069 SSR 109.30 No other positions
SB06098 SSR 115.90 No other positions
SB06109 SSR 127.20 No other positions
Xtxp95 SSR 136.00 No other positions
SB06122 SSR 142.60 No other positions
SB06127 SSR 147.90 No other positions
gpsb169 SSR 154.20 No other positions
SB06142 SSR 163.50 No other positions