CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Vadez et al. Salt tolerance
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Vadez et al. 2012 ICCV2 x JG62 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 13.10 cM
Features by Type:
3 unknown marker
1 RAPD
4 SSR
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Chickpea - Vadez et al. 2012 ICCV2 x JG62 - LG4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TA127 unknown marker 0.00 Chickpea - Varshney_352 loci - LG08 TA127 SSR 57.06 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TA127 SSR 19.23 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TA127 SSR 38.80 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG08 TA127 SSR 55.92 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TA127 SSR 81.50 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 6 TA127 SSR 14.67 (cM) Automated name-based View Maps
TR2 unknown marker 3.50 Chickpea - Winter_354 loci - LG 3 TR2 SSR 96.20 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 TR2 SSR 20.34 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TR2 SSR 37.57 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR2 Winter_published 60.30 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 TR2 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 6 TR2 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 TR2 SSR 54.19 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR2 SSR 37.96 (cM) Automated name-based View Maps
TA35 SSR 3.50 Chickpea - Radhika_230 loci - LG 3 TA35 SSR 96.30 (cM) Automated name-based View Maps
TA144 unknown marker 3.50 Chickpea - Radhika_230 loci - LG 6 TA144 SSR 38.50 (cM) Automated name-based View Maps
TA25 SSR 4.30 Chickpea - Varshney_352 loci - LG08 TA25 SSR 55.90 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TA25 SSR 37.53 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 6 TA25 SSR 11.07 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TA25 SSR 19.60 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TA25 SSR 18.74 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG08 TA25 SSR 53.25 (cM) Automated name-based View Maps
TA3 SSR 4.30 Chickpea - Chickpea_QTL_SNP - 8 TA3 SSR 22.18 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 TA3 SSR 64.25 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 8 TA3 Winter_published 98.50 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TA3 SSR 18.37 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 TA3 Winter 63.85 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 TA3 Winter 66.80 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 TA3 SSR 57.11 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 TA3 SSR 127.90 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TA3 SSR 39.23 (cM) Automated name-based View Maps
TS57 SSR 6.50 Chickpea - Varshney_352 loci - LG08 TS57 SSR 59.33 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TS57 SSR 15.14 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TS57 SSR 41.46 (cM) Automated name-based View Maps
NO_Y_13 RAPD 13.10 Chickpea - Millan_229 loci - LG08 NO_Y_13 RAPD 48.00 (cM) Automated name-based View Maps