CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Vadez et al. Salt tolerance
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
RAPD
Sequence tagged microsatellite site
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Vadez et al. 2012 ICCV2 x JG62 [ View Map Set Info ]
Map Name: LG6
Map Start: 0.00 cM
Map Stop: 89.20 cM
Features by Type:
21 unknown marker
7 RAPD
12 SSR
4 Sequence tagged microsatellite site
44 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 44.       of 2 | Next
Chickpea - Vadez et al. 2012 ICCV2 x JG62 - LG6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TA2 SSR 0.00 Chickpea - Nayak_521 loci - LG 4 TA2 Winter_published 245.40 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA2 SSR 109.80 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 TA2 SSR 71.99 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TA2 SSR 40.92 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA2 Winter 72.39 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA2 unknown marker 52.00 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA2 RAPD 45.00 (cM) Automated name-based View Maps
GA137 SSR 5.60 Chickpea - Varshney_241 loci - LG04 GA137 SSR 11.73 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 GA137 SSR 12.91 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 GA137 SSR 105.14 (cM) Automated name-based View Maps
GA25 unknown marker 9.30 No other positions
TA186 SSR 9.30 Chickpea - Radhika_230 loci - LG 2 TA186 SSR 75.30 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA186 RAPD 42.00 (cM) Automated name-based View Maps
opng11 Sequence tagged microsatellite site 9.30 Chickpea - Millan_229 loci - LG04b opng11 Sequence tagged microsatellite site 44.00 (cM) Automated name-based View Maps
TR20s SSR 9.70 Chickpea - Radhika_230 loci - LG 2 TR20s SSR 67.00 (cM) Automated name-based View Maps
Opng8 RAPD 10.00 Chickpea - Millan_229 loci - LG04b opng8 RAPD 39.00 (cM) Automated name-based View Maps
TA130s unknown marker 10.00 No other positions
TR8 SSR 10.00 Chickpea - Millan_229 loci - LG04b TR8 unknown marker 38.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 TR8 SSR 58.52 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 TR8 SSR 52.79 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 TR8 SSR 60.16 (cM) Automated name-based View Maps
UBC295a RAPD 10.00 Chickpea - Millan_229 loci - LG04b ubc295a RAPD 42.00 (cM) Automated name-based View Maps
UBC465 unknown marker 10.00 Chickpea - Millan_229 loci - LG04b UBC465 RAPD 46.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 UBC465 RAPD 55.90 (cM) Automated name-based View Maps
TA46 SSR 28.10 Chickpea - Millan_555 loci - LG 4 TA46 AFLP 84.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA46 Winter_published 347.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA46 Winter 89.69 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TA46 SSR 22.13 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA46 RAPD 55.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG04 TA46 Winter 64.10 (cM) Automated name-based View Maps
TA89 SSR 28.10 Chickpea - Varshney_352 loci - LG04 TA89 SSR 97.69 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TA89 SSR 76.40 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG04 TA89 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA89 RAPD 58.00 (cM) Automated name-based View Maps
TA146 SSR 44.10 Chickpea - Varshney_168 loci - LG04 TA146 SSR 19.35 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 TA146 SSR 77.53 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA146 AFLP 53.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TA146 SSR 62.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA146 Winter 73.24 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA146 Winter_published 244.10 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA146 SSR 106.80 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG04 TA146 Winter 53.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TA146 SSR 41.58 (cM) Automated name-based View Maps
TA72 SSR 44.10 Chickpea - Radhika_230 loci - LG 2 TA72 SSR 63.20 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA72 Winter_published 244.10 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG04 TA72 Winter 51.70 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA72 RAPD 54.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TA72 SSR 42.91 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA72 Winter 73.06 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA72 RAPD 36.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA72 SSR 107.50 (cM) Automated name-based View Maps
TS54 SSR 44.10 Chickpea - Radhika_230 loci - LG 2 TS54 SSR 59.70 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TS54 RAPD 52.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TS54 Winter_published 258.80 (cM) Automated name-based View Maps
NO_115 unknown marker 44.10 No other positions
NO_109 RAPD 46.60 Chickpea - Millan_229 loci - LG04b NO_109 RAPD 42.00 (cM) Automated name-based View Maps
NO_112_2 unknown marker 46.60 No other positions
G8g2 RAPD 46.60 Chickpea - Millan_229 loci - LG04b G8g2 RAPD 43.00 (cM) Automated name-based View Maps
NO_187_1 unknown marker 46.60 No other positions
NO_116_1 unknown marker 46.60 No other positions
NO_130 unknown marker 46.60 No other positions
NO_187_2 unknown marker 46.60 No other positions
NO_4 unknown marker 46.60 No other positions