CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Nayak_521 loci
(Reference Set)
Chickpea-Gujaria_300 loci
Min.
Correspondences
Align Vertically
Stack
Maps LG 3 LG03
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
CAPS
Conserved Intron Spanning Region
COS-SNP
DArT
EST-SSR
RAPD
SSR
Winter
Winter_published
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Nayak et al. 2010_ICC 4958 X PI 489777 [ View Map Set Info ]
Map Name: LG 3
Map Start: 0.00 cM
Map Stop: 279.10 cM
Features by Type:
10 AFLP
15 COS-SNP
9 RAPD
17 SSR
24 Winter_published
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 75.       of 3 | Next
Chickpea - Nayak et al. 2010_ICC 4958 X PI 489777 - LG 3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TA76 Winter_published 279.10 Chickpea - Hiremath_1328 loci - LG03 TA76 SSR 97.14 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TA76 SSR 243.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TA76 Winter 85.45 (cM) Automated name-based View Maps
GAA45 Winter_published 273.10 Chickpea - Thudi_1291 loci - LG 3 GAA45 SSR 90.41 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 GAA45 SSR 250.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 GAA45 SSR 101.88 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 GAA45 RAPD 103.00 (cM) Automated name-based View Maps
AJ012739 COS-SNP 262.40 Chickpea - Gujaria_300 loci - LG03 AJ012739 COS-SNP 57.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 AJ012739 COS-SNP 65.63 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 AJ012739 87.94 (cM) Automated name-based View Maps
OPD03_5 RAPD 258.70 No other positions
CAMCAG11 AFLP 252.50 No other positions
marker8882 Winter_published 231.60 No other positions
SAMS Winter_published 210.20 Chickpea - Thudi_1291 loci - LG 1 SAMS Winter 69.36 (cM) Automated name-based View Maps
STMS5 Winter_published 206.50 Chickpea - Thudi_1291 loci - LG 3 STMS5 Winter 68.33 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 STMS5 RAPD 86.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 STMS5 SSR 208.60 (cM) Automated name-based View Maps
TR26 Winter_published 206.50 Chickpea - Chickpea_QTL_SNP - 1 TR26 SSR 37.95 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TR26 AFLP 86.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 TR26 SSR 79.62 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR26 SSR 67.72 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR26 SSR 208.10 (cM) Automated name-based View Maps
OPL42 RAPD 201.30 Chickpea - Millan_555 loci - LG 3 OPL42 RAPD 92.00 (cM) Automated name-based View Maps
ICCM0045 SSR 195.40 Chickpea - Thudi_1291 loci - LG 3 ICCM0045 SSR 59.13 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 ICCM0045 71.37 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG03 ICCM0045 SSR 48.26 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 ICCM0045 SSR 41.00 (cM) Automated name-based View Maps
ENOL COS-SNP 193.60 Chickpea - Hiremath_1328 loci - LG03 ENOL 77.89 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ENOL COS-SNP 77.63 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 ENOL COS-SNP 48.30 (cM) Automated name-based View Maps
TC86212 COS-SNP 192.00 Chickpea - Hiremath_1328 loci - LG03 TC86212 75.85 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TC86212 COS-SNP 65.90 (cM) Automated name-based View Maps
OPP06_2 RAPD 188.80 No other positions
OPP06_1 RAPD 188.40 No other positions
CAMCAT11 AFLP 184.40 No other positions
marker807 Winter_published 181.50 Chickpea - Millan_555 loci - LG 3 marker807 unknown marker 76.00 (cM) Automated name-based View Maps
TA64 Winter_published 175.60 Chickpea - Hiremath_1328 loci - LG03 TA64 SSR 63.86 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TA64 SSR 164.40 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TA64 Winter 51.29 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TA64 SSR 113.10 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TA64 Gene Sequence 66.00 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TA64 SSR 12.60 (cM) Automated name-based View Maps
TC78638 COS-SNP 171.70 Chickpea - Gujaria_300 loci - LG03 TC78638 COS-SNP 34.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TC78638 COS-SNP 83.47 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 TC78638 65.70 (cM) Automated name-based View Maps
OPC14_5 RAPD 169.80 No other positions
AGT COS-SNP 169.80 Chickpea - Gujaria_300 loci - LG03 AGT COS-SNP 28.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 AGT 61.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 AGT COS-SNP 88.45 (cM) Automated name-based View Maps
TC76881 COS-SNP 166.50 Chickpea - Hiremath_1328 loci - LG03 TC76881 56.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TC76881 COS-SNP 92.01 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 TC76881 COS-SNP 22.90 (cM) Automated name-based View Maps
AJ004917 COS-SNP 166.50 Chickpea - Thudi_1291 loci - LG 3 AJ004917 COS-SNP 40.88 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 AJ004917 COS-SNP 22.80 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG03 AJ004917 56.13 (cM) Automated name-based View Maps
RNAH COS-SNP 163.30 Chickpea - Hiremath_1328 loci - LG03 RNAH 56.10 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 RNAH COS-SNP 22.40 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 RNAH COS-SNP 40.32 (cM) Automated name-based View Maps
MSL591 COS-SNP 163.30 Chickpea - Hiremath_1328 loci - LG03 MSL591 51.04 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 MSL591 COS-SNP 27.47 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 MSL591 COS-SNP 12.30 (cM) Automated name-based View Maps