CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Nayak_521 loci
(Reference Set)
Chickpea-Chickpea_QTL_SNP
Min.
Correspondences
Align Vertically
Stack
Maps LG 8 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
COS-SNP
RAPD
SSR
Winter_published
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Nayak et al. 2010_ICC 4958 X PI 489777 [ View Map Set Info ]
Map Name: LG 8
Map Start: 0.00 cM
Map Stop: 124.70 cM
Features by Type:
4 AFLP
6 COS-SNP
2 RAPD
6 SSR
7 Winter_published
25 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 25.
Chickpea - Nayak et al. 2010_ICC 4958 X PI 489777 - LG 8
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TS12 Winter_published 124.70 Chickpea - Winter_354 loci - LG 8 TS12 SSR 157.70 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 TS12 SSR 74.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TS12 SSR 78.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 TS12 SSR 67.93 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 TS12 SSR 71.94 (cM) Automated name-based View Maps
H5B04 SSR 108.20 Chickpea - Thudi_1291 loci - LG 8 H5B04 SSR 55.23 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 H5B04 52.65 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 H5B04 SSR 20.49 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 H5B04 SSR 68.50 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 H5B04 SSR 53.00 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 8 H5B04 SSR 25.96 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 H5B04 SSR 35.56 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 H5B04 SSR 53.33 (cM) Automated name-based View Maps
H1C092 SSR 108.20 Chickpea - Gujaria_300 loci - LG08 H1C092 SSR 53.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 H1C092 SSR 55.11 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 H1C092 52.40 (cM) Automated name-based View Maps
H1D24 SSR 108.20 Chickpea - Gujaria_300 loci - LG08 H1D24 SSR 53.10 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG08 H1D24 SSR 60.51 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 H1D24 SSR 55.15 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 H1D24 52.23 (cM) Automated name-based View Maps
TA3 Winter_published 98.50 Chickpea - Thudi_1291 loci - LG 8 TA3 Winter 63.85 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 TA3 Winter 66.80 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 TA3 SSR 57.11 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TA3 SSR 39.23 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 TA3 SSR 127.90 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 TA3 SSR 64.25 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TA3 SSR 18.37 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG4 TA3 SSR 4.30 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 8 TA3 SSR 22.18 (cM) Automated name-based View Maps
AAMCTA14 AFLP 91.10 No other positions
AAMCTA11 AFLP 76.40 No other positions
TA3R_TA2 SSR 72.90 No other positions
OPQ11_2 RAPD 66.90 No other positions
PGMb Winter_published 60.50 Chickpea - Gujaria_300 loci - LG08 PGMb Winter 44.60 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 PGMb unknown marker 82.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 PGMb 46.18 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 PGMb Winter 46.54 (cM) Automated name-based View Maps
ACONc Winter_published 53.90 Chickpea - Thudi_1291 loci - LG 8 ACONc Winter 37.48 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 ACONc unknown marker 66.20 (cM) Automated name-based View Maps
G6PD Winter_published 53.90 Chickpea - Thudi_1291 loci - LG 8 G6PD Winter 40.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 G6PD unknown marker 41.20 (cM) Automated name-based View Maps
FENR COS-SNP 50.40 Chickpea - Gujaria_300 loci - LG08 FENR COS-SNP 28.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 FENR COS-SNP 32.94 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 FENR 29.62 (cM) Automated name-based View Maps
U71 COS-SNP 49.20 Chickpea - Hiremath_1328 loci - LG08 U71 SNP 24.48 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 U71 COS-SNP 26.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 U71 COS-SNP 30.31 (cM) Automated name-based View Maps
X60755 COS-SNP 49.20 Chickpea - Gujaria_300 loci - LG08 X60755 COS-SNP 27.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 X60755 SNP 24.89 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 X60755 COS-SNP 32.15 (cM) Automated name-based View Maps
Ts45 Winter_published 47.60 Chickpea - Gujaria_300 loci - LG08 Ts45 SSR 30.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 Ts45 SSR 34.40 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 TS45 SSR 26.08 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 Ts45 SSR 30.13 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 8 TS45 SSR 71.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 6 TS45 SSR 18.00 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 8 TS45 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG08 TS45 SSR 26.14 (cM) Automated name-based View Maps
ICCM0130 SSR 34.20 No other positions
ICCM0072 SSR 29.40 Chickpea - Hiremath_1328 loci - LG08 ICCM0072 4.71 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG08 ICCM0072 SSR 1.34 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 ICCM0072 SSR 13.28 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 ICCM0072 SSR 9.10 (cM) Automated name-based View Maps
CAMCAG03 AFLP 25.70 No other positions
GAA46 Winter_published 21.70 Chickpea - Thudi_1291 loci - LG 8 GAA46 SSR 8.82 (cM) Automated name-based View Maps
MSU89 COS-SNP 15.80 Chickpea - Thudi_1291 loci - LG 8 MSU89 COS-SNP 9.85 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 MSU89 5.77 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 MSU89 COS-SNP 4.70 (cM) Automated name-based View Maps
CYSK COS-SNP 14.10 Chickpea - Gujaria_300 loci - LG08 CYSK COS-SNP 2.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 CYSK 2.38 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 CYSK COS-SNP 7.12 (cM) Automated name-based View Maps
AAMCTT02 AFLP 13.80 Chickpea - Gujaria_300 loci - LG08 AAMCTT02 AFLP 0.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 AAMCTT02 SSR 1.88 (cM) Automated name-based View Maps
CYSS COS-SNP 11.50 Chickpea - Thudi_1291 loci - LG 8 CYSS COS-SNP 4.55 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 CYSS COS-SNP 0.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 CYSS 3.35 (cM) Automated name-based View Maps
OPG09_5 RAPD 0.00 No other positions