CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Radhika_230 loci
(Reference Set)
Chickpea-Thudi_1291 loci
Min.
Correspondences
Align Vertically
Stack
Maps LG 1 LG 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
BES-SSR
bin1
bin10
bin11
bin12
bin2
bin3
bin4
bin5
bin6
bin7
bin8
bin9
CAPS
Conserved Intron Spanning Region
COS-SNP
DArT
EST-SSR
RAPD
SSR
Winter
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Radhika et al. 2007_Consensus_Intra-specific [ View Map Set Info ]
Map Name: LG 1
Map Start: 0.00 cM
Map Stop: 132.40 cM
Features by Type:
9 RAPD
54 SSR
63 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 63.       of 3 | Next
Chickpea - Radhika et al. 2007_Consensus_Intra-specific - LG 1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
H3C06 SSR 0.00 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 H3C06 SSR 64.01 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 H3C06 SSR 23.08 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 H3C06 SSR 2.32 (cM) Automated name-based View Maps
TA130 SSR 6.50 Chickpea - Winter_354 loci - LG 4 TA130 SSR 78.30 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA130 RAPD 28.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TA130 SSR 44.35 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG04 TA130 SSR 36.59 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA130 Winter_published 149.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA130 Winter 52.51 (cM) Automated name-based View Maps
UBC467 RAPD 8.20 No other positions
H1B02 SSR 21.40 No other positions
TR60 SSR 22.70 No other positions
TA34s SSR 23.90 No other positions
SSR8y SSR 32.10 No other positions
UBC360 RAPD 36.60 No other positions
TR33 SSR 37.60 No other positions
NCPGR48 SSR 37.80 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 NCPGR48 SSR 88.62 (cM) Automated name-based View Maps
TR29 SSR 38.60 Chickpea - Nayak_521 loci - LG 5 TR29 Winter_published 175.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TR29 SSR 95.53 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TR29 SSR 205.20 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TR29 SSR 87.17 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 TR29 SSR 23.47 (cM) Automated name-based View Maps
UBC238y RAPD 40.90 No other positions
TA5 SSR 42.10 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 TA5 SSR 16.82 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG05 TA5 SSR 18.11 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TA5 Winter_published 145.60 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG05 TA5 SSR 16.39 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 TA5 unknown marker 30.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TA5 SSR 142.50 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TA5 SSR 83.03 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TA5 Winter 90.35 (cM) Automated name-based View Maps
TR59 SSR 45.30 Chickpea - Millan_555 loci - LG 5 TR59 RAPD 31.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TR59 SSR 87.30 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TR59 Winter_published 170.50 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TR59 SSR 173.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TR59 SSR 1.70 (cM) Automated name-based View Maps
TS35 SSR 49.30 Chickpea - Hiremath_1328 loci - LG05 Ts35 SSR 43.70 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TS35 SSR 63.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 Ts35 SSR 47.60 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TS35 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 1 TS35 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 Ts35 Winter_published 58.10 (cM) Automated name-based View Maps
UBC811 RAPD 49.90 No other positions
TS43 SSR 50.40 Chickpea - Chickpea_QTL_SNP - 1 TS43 SSR 12.89 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TS43 SSR 86.96 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TS43 Winter_published 147.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TS43 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 TS43 SSR 171.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TS43 SSR 79.85 (cM) Automated name-based View Maps
TAA137 SSR 51.00 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 TAA137 SSR 11.99 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG05 TAA137 SSR 17.19 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG05 TAA137 SSR 19.77 (cM) Automated name-based View Maps
TR29s SSR 52.90 Chickpea - Vadez et al. Salt tolerance - LG7 TR29s SSR 1.70 (cM) Automated name-based View Maps
TA116x SSR 56.10 No other positions
TA43 SSR 56.60 No other positions
TA42 SSR 59.70 Chickpea - Millan_555 loci - LG 5 TA42 RAPD 31.00 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 5 TA42 SSR 13.27 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 TA42 SSR 13.97 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG05 TA42 SSR 14.33 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TA42 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG05 TA42 SSR 12.56 (cM) Automated name-based View Maps
H4D12 SSR 62.60 No other positions
NCPGR77 SSR 63.70 No other positions
NCPGR53 SSR 64.90 No other positions