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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
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Correspondences
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Maps LG 9
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 9
Map Start: 0.00 cM
Map Stop: 40.50 cM
Features by Type:
3 AFLP
2 unknown marker
2 RAPD
1 SSR
8 Total

Map Features

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Items 1 to 8 of 8.
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
OPA12-1 RAPD 0.00 No other positions
ECAMCAG07 AFLP 11.80 No other positions
ECAMCAG06 AFLP 14.40 No other positions
ECAMCAG05 AFLP 16.80 No other positions
STMS6 SSR 17.90 Chickpea - Nayak_521 loci - LG 7 STMS6 Winter_published 55.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 STMS6 Winter 103.79 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG07 STMS6 SSR 51.03 (cM) Automated name-based View Maps
ISSR8561 unknown marker 22.50 Chickpea - Gujaria_300 loci - LG02 ISSR8561 Winter 125.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 ISSR8561 50.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 ISSR8561 Winter 106.26 (cM) Automated name-based View Maps
ISSR8591 unknown marker 25.50 Chickpea - Hiremath_1328 loci - LG07 ISSR8591 45.41 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 ISSR8591 Winter 126.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 ISSR8591 Winter 108.02 (cM) Automated name-based View Maps
OPC183 RAPD 40.50 Chickpea - Nayak_521 loci - LG 7 OPC183 RAPD 84.70 (cM) Automated name-based View Maps