CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
Gene Sequence
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 8
Map Start: 0.00 cM
Map Stop: 157.70 cM
Features by Type:
4 AFLP
2 Gene Sequence
3 unknown marker
2 RAPD
3 SSR
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
EAAMCTT02 AFLP 0.00 No other positions
S1E1 Gene Sequence 15.30 Chickpea - Thudi_1291 loci - LG 8 S1E1 Winter 0.00 (cM) Automated name-based View Maps
ECAMCAG03 AFLP 26.70 No other positions
OPG09-5 RAPD 33.70 No other positions
G6PD unknown marker 41.20 Chickpea - Thudi_1291 loci - LG 8 G6PD Winter 40.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 8 G6PD Winter_published 53.90 (cM) Automated name-based View Maps
ACONc unknown marker 66.20 Chickpea - Nayak_521 loci - LG 8 ACONc Winter_published 53.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 ACONc Winter 37.48 (cM) Automated name-based View Maps
TS45 SSR 71.00 Chickpea - Radhika_230 loci - LG 6 TS45 SSR 18.00 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG08 TS45 SSR 26.14 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 8 TS45 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 TS45 SSR 26.08 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 8 Ts45 Winter_published 47.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 Ts45 SSR 30.13 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 Ts45 SSR 30.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 Ts45 SSR 34.40 (cM) Automated name-based View Maps
OPQ11 RAPD 75.70 No other positions
PGMb unknown marker 82.00 Chickpea - Nayak_521 loci - LG 8 PGMb Winter_published 60.50 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 PGMb Winter 44.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 PGMb Winter 46.54 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 PGMb 46.18 (cM) Automated name-based View Maps
EAAMCTA14 AFLP 91.60 No other positions
EAAMCTA11 AFLP 104.10 No other positions
TA3 SSR 127.90 Chickpea - Vadez et al. Salt tolerance - LG4 TA3 SSR 4.30 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 TA3 SSR 64.25 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 TA3 Winter 66.80 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG08 TA3 SSR 39.23 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG08 TA3 SSR 18.37 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 TA3 Winter 63.85 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 8 TA3 SSR 22.18 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG08 TA3 SSR 57.11 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 8 TA3 Winter_published 98.50 (cM) Automated name-based View Maps
S-SAPF4.1 Gene Sequence 141.30 No other positions
TS12 SSR 157.70 Chickpea - Radhika_230 loci - LG 3 TS12 SSR 78.40 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 8 TS12 Winter_published 124.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG08 TS12 SSR 67.93 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG08 TS12 SSR 74.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 8 TS12 SSR 71.94 (cM) Automated name-based View Maps