CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG 7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
Gene Sequence
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 7
Map Start: 0.00 cM
Map Stop: 224.50 cM
Features by Type:
8 AFLP
2 Gene Sequence
7 unknown marker
12 RAPD
17 SSR
46 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 46.       of 2 | Next
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
OPT12-1 RAPD 13.50 No other positions
ISSR8682 unknown marker 17.10 Chickpea - Hiremath_1328 loci - LG05 ISSR8682 5.10 (cM) Automated name-based View Maps
STMS20 SSR 18.90 Chickpea - Hiremath_1328 loci - LG05 STMS20 SSR 10.46 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS20 Winter_published 381.50 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 STMS20 AFLP 28.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 STMS20 Winter 1.02 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG05 STMS20 Winter 6.30 (cM) Automated name-based View Maps
STMS8 SSR 25.10 Chickpea - Gujaria_300 loci - LG05 STMS8 Winter 9.50 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 STMS8 SSR 11.92 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 STMS8 Winter 9.14 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS8 Winter_published 14.80 (cM) Automated name-based View Maps
EAAMCTT06 AFLP 32.20 No other positions
ISSR889 unknown marker 42.80 Chickpea - Hiremath_1328 loci - LG05 ISSR889 14.51 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 ISSR889 Winter 0.00 (cM) Automated name-based View Maps
OPT12-4 RAPD 42.80 Chickpea - Millan_555 loci - LG 5 OPT12-4 unknown marker 16.00 (cM) Automated name-based View Maps
OPJ13-1 RAPD 42.80 No other positions
R360-8-1 unknown marker 45.40 No other positions
STMS22 SSR 51.80 Chickpea - Thudi_1291 loci - LG 5 STMS22 Winter 29.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS22 Winter_published 369.50 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 STMS22 SSR 29.50 (cM) Automated name-based View Maps
ECAMCAT12 AFLP 55.80 Chickpea - Winter_354 loci - LG 2 ECAMCAT12 AFLP 124.30 (cM) Automated name-based View Maps
OPU17-2 RAPD 63.20 Chickpea - Millan_555 loci - LG 5 OPU17-2 RAPD 44.00 (cM) Automated name-based View Maps
OPQ13-3 RAPD 63.20 Chickpea - Millan_555 loci - LG 5 OPQ13-3 Gene Sequence 44.00 (cM) Automated name-based View Maps
TS35 SSR 63.20 Chickpea - Nayak_521 loci - LG 5 Ts35 Winter_published 58.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 Ts35 SSR 47.60 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TS35 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TS35 SSR 49.30 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 1 TS35 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 Ts35 SSR 43.70 (cM) Automated name-based View Maps
OPAB09-3 RAPD 78.80 No other positions
ECAMCAG04 AFLP 80.50 No other positions
ECAMCAT08 AFLP 89.50 No other positions
RGA-C Gene Sequence 97.70 No other positions
OPN06-2 RAPD 102.90 Chickpea - Millan_555 loci - LG 5 OPN06-2 RAPD 41.13 (cM) Automated name-based View Maps
GA4 SSR 109.20 Chickpea - Thudi_1291 loci - LG 5 GA4 SSR 70.15 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 GA4 RAPD 45.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 GA4 Winter_published 118.80 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 GA4 SSR 66.84 (cM) Automated name-based View Maps
OPC06-2 RAPD 112.70 Chickpea - Millan_555 loci - LG 5 OPC06-2 RAPD 38.00 (cM) Automated name-based View Maps
OPT12-2 RAPD 116.50 No other positions
OPP07-1 RAPD 128.40 No other positions
TA5 SSR 142.50 Chickpea - Radhika_230 loci - LG 1 TA5 SSR 42.10 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TA5 Winter_published 145.60 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 TA5 SSR 16.82 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 TA5 unknown marker 30.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TA5 Winter 90.35 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG05 TA5 SSR 16.39 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG05 TA5 SSR 18.11 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TA5 SSR 83.03 (cM) Automated name-based View Maps
STMS19 SSR 151.00 Chickpea - Hiremath_1328 loci - LG05 STMS19 SSR 81.05 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS19 Winter_published 147.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 STMS19 Winter 88.08 (cM) Automated name-based View Maps