CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 6
Map Start: 0.00 cM
Map Stop: 214.80 cM
Features by Type:
7 AFLP
4 unknown marker
12 RAPD
12 SSR
35 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 35.       of 2 | Next
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
OPC15-1 RAPD 0.00 Chickpea - Millan_555 loci - LG 6 OPC15-1 RAPD 24.00 (cM) Automated name-based View Maps
OPU03-5 RAPD 4.00 No other positions
OPC06-1 RAPD 5.90 Chickpea - Millan_555 loci - LG 6 OPC06-1 AFLP 25.00 (cM) Automated name-based View Maps
OPO04-2 RAPD 8.80 Chickpea - Millan_555 loci - LG 6 OPO04-2 RAPD 21.00 (cM) Automated name-based View Maps
OPC20-1 RAPD 15.90 Chickpea - Millan_555 loci - LG 6 OPC20-1 RAPD 16.00 (cM) Automated name-based View Maps
OPJ13-2 RAPD 25.90 Chickpea - Millan_555 loci - LG 6 OPJ13-2 RAPD 14.00 (cM) Automated name-based View Maps
OPA17-2 RAPD 41.80 Chickpea - Millan_555 loci - LG 6 OPA17-2 RAPD 15.00 (cM) Automated name-based View Maps
OPC15-4 RAPD 51.20 No other positions
OPAB09-5 RAPD 74.60 No other positions
STMS15 SSR 88.70 Chickpea - Varshney_168 loci - LG06 STMS15 SSR 62.67 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG06 STMS15 SSR 3.51 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 6 STMS15 RAPD 4.00 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 4 STMS15 SSR 97.30 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 6 STMS15 SSR 13.20 (cM) Automated name-based View Maps
TA14 SSR 92.30 Chickpea - Millan_555 loci - LG 6 TA14 RAPD 0.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 6 TA14 Winter_published 14.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG06 TA14 SSR 65.29 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG06 TA14 SSR 1.93 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG06 TA14 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG06 TA14 SSR 63.75 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG06 TA14 SSR 45.22 (cM) Automated name-based View Maps
TR44 SSR 103.50 Chickpea - Chickpea_QTL_SNP - 4 TR44 SSR 9.34 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 6 TR44 SSR 94.46 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TR44 SSR 110.50 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG3 TR44 SSR 23.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG06 TR44 SSR 58.53 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 6 TR44 Winter_published 49.70 (cM) Automated name-based View Maps
EACMCAC01 AFLP 108.30 Chickpea - Millan_555 loci - LG 6 EACMCAC01 RAPD 18.00 (cM) Automated name-based View Maps
ECAMCTA04 AFLP 112.20 No other positions
ECAMCTA07 AFLP 114.90 Chickpea - Winter_354 loci - LG 2 ECAMCTA07 AFLP 126.30 (cM) Automated name-based View Maps
ECAMCTA02 AFLP 114.90 Chickpea - Millan_555 loci - LG 6 ECAMCTA02 RAPD 22.00 (cM) Automated name-based View Maps
EAAMCTA08 AFLP 114.90 No other positions
EACMCAC04 AFLP 116.00 No other positions
EACMCAC10 AFLP 119.30 Chickpea - Millan_555 loci - LG 6 EACMCAC10 RAPD 30.00 (cM) Automated name-based View Maps
ISSR8402 unknown marker 136.80 Chickpea - Hiremath_1328 loci - LG06 ISSR8402 63.59 (cM) Automated name-based View Maps
TR1 SSR 146.90 Chickpea - Thudi_1291 loci - LG 6 TR1 SSR 90.22 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 4 TR1 SSR 66.60 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 6 TR1 SSR 111.00 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 6 TR1 RAPD 17.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG06 TR1 SSR 55.86 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 4 TR1 SSR 0.00 (cM) Automated name-based View Maps
OPN06-4 RAPD 148.60 Chickpea - Millan_555 loci - LG 6 OPN06-4 AFLP 23.00 (cM) Automated name-based View Maps
AF2 unknown marker 151.90 No other positions
AF00 unknown marker 153.50 No other positions
OPD03-2 RAPD 159.00 Chickpea - Millan_555 loci - LG 6 OPD03-2 RAPD 24.00 (cM) Automated name-based View Maps