CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Winter_354 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
Gene Sequence
RAPD
SSR
unknown marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG 2
Map Start: 0.00 cM
Map Stop: 285.90 cM
Features by Type:
7 AFLP
2 Gene Sequence
10 unknown marker
6 RAPD
11 SSR
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Chickpea - Winter et al. 2000_ICC 4958 × PI 489777 - LG 2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TR19 SSR 0.00 Chickpea - Varshney_168 loci - LG02 TR19 SSR 48.72 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TR19 SSR 30.03 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TR19 Winter_published 38.30 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TR19 CAPS 34.90 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TR19 SSR 57.57 (cM) Automated name-based View Maps
OPP15-1 RAPD 21.30 Chickpea - Millan_555 loci - LG 2 OPP15-1 RAPD 31.00 (cM) Automated name-based View Maps
OPD05-1 RAPD 26.30 No other positions
OPD03-1 RAPD 34.50 No other positions
OPC14-4 RAPD 45.90 Chickpea - Millan_555 loci - LG 2 OPC14-4 RAPD 22.00 (cM) Automated name-based View Maps
R260-07-2 unknown marker 53.80 No other positions
OPU18 RAPD 54.40 Chickpea - Nayak_521 loci - LG 2 OPU18 RAPD 82.50 (cM) Automated name-based View Maps
ISSR8262 unknown marker 63.30 Chickpea - Gujaria_300 loci - LG02 ISSR8262 Winter 36.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 ISSR8262 32.36 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 ISSR8262 Winter 31.08 (cM) Automated name-based View Maps
GA16 SSR 69.50 Chickpea - Varshney_168 loci - LG02 GA16 SSR 0.90 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 GA16 SSR 60.33 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 GA16 SSR 14.92 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 GA16 Winter_published 0.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 GA16 Winter 27.74 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 GA16 SSR 29.30 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 GA16 SSR 67.73 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 GA16 unknown marker 0.00 (cM) Automated name-based View Maps
REPT10 unknown marker 83.60 No other positions
ISSR8553 unknown marker 109.80 Chickpea - Thudi_1291 loci - LG 2 ISSR8553 Winter 60.03 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 ISSR8553 Winter 68.30 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 ISSR8553 40.01 (cM) Automated name-based View Maps
CS27 unknown marker 114.70 Chickpea - Millan_229 loci - LG02 CS27 unknown marker 38.00 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 CS27 RAPD 27.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 CS27 Winter 113.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 CS27 Winter 57.78 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 CS27 unknown marker 17.20 (cM) Automated name-based View Maps
Foc4 Gene Sequence 118.40 Chickpea - Nayak_521 loci - LG 2 Foc4 Winter_published 113.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 Foc4 Winter 58.34 (cM) Automated name-based View Maps
TA96 SSR 121.80 Chickpea - Millan_555 loci - LG 2 TA96 unknown marker 28.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TA96 Winter 63.20 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG2 TA96 SSR 5.10 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG3 TA96 unknown marker 129.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TA96 Winter 56.33 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 TA96 SSR 33.38 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 TA96 SSR 33.99 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TA96 SSR 10.80 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TA96 SSR 47.73 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TA96 Winter_published 114.90 (cM) Automated name-based View Maps
ECAMCAT12 AFLP 124.30 Chickpea - Winter_354 loci - LG 7 ECAMCAT12 AFLP 55.80 (cM) Automated name-based View Maps
ECAMCTA07 AFLP 126.30 Chickpea - Winter_354 loci - LG 6 ECAMCTA07 AFLP 114.90 (cM) Automated name-based View Maps
BIGR5F2A unknown marker 132.70 Chickpea - Winter_354 loci - LG 7 BIGR5F2A unknown marker 171.10 (cM) Automated name-based View Maps
Foc5 Gene Sequence 136.20 Chickpea - Millan_555 loci - LG 2 Foc5 RAPD 34.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 Foc5 Winter_published 119.40 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 Foc5 Winter 60.52 (cM) Automated name-based View Maps
TA27 SSR 137.60 Chickpea - Millan_555 loci - LG 2 TA27 unknown marker 30.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA27 SSR 43.82 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TA27 Winter 64.70 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG02 TA27 SSR 34.72 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 TA27 SSR 33.99 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TA27 Winter 55.61 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TA27 Winter_published 119.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TA27 SSR 48.23 (cM) Automated name-based View Maps
TA59 SSR 140.30 Chickpea - Millan_555 loci - LG 2 TA59 RAPD 30.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TA59 Winter_published 120.10 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TA59 Winter 62.90 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TA59 SSR 47.97 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG02 TA59 SSR 43.33 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TA59 SSR 21.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TA59 Winter 56.01 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG2 TA59 SSR 5.10 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA59 SSR 53.12 (cM) Automated name-based View Maps
CS27ASAP unknown marker 144.80 Chickpea - Thudi_1291 loci - LG 2 CS27ASAP Winter 54.51 (cM) Automated name-based View Maps
TS82 SSR 145.40 Chickpea - Nayak_521 loci - LG 2 TS82 Winter_published 165.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TS82 SSR 53.24 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TS82 SSR 52.80 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 TS82 RAPD 25.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TS82 SSR 45.89 (cM) Automated name-based View Maps
TAA60 SSR 146.50 Chickpea - Hiremath_1328 loci - LG02 TAA60 SSR 44.89 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 2 TAA60 Gene Sequence 24.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TAA60 Winter 47.98 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TAA60 Winter 51.30 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 3 TAA60 SSR 69.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TAA60 Winter_published 165.90 (cM) Automated name-based View Maps
TR58 SSR 148.90 Chickpea - Vadez et al. Salt tolerance - LG1 TR58 SSR 5.60 (cM) Automated name-based View Maps
TA194 SSR 159.10 Chickpea - Millan_555 loci - LG 2 TA194 Gene Sequence 19.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 2 TA194 Winter_published 166.50 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TA194 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG02 TA194 SSR 44.55 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 2 TA194 Winter 47.08 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG02 TA194 SSR 46.49 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG02 TA194 SSR 29.72 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 TA194 Winter 51.00 (cM) Automated name-based View Maps