CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Hiremath_1328 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG03
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
BES-SSR
Conserved Intron Spanning Region
DArT
EST-SSR
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Hiremath et al. (2011) 1328 loci map [ View Map Set Info ]
Map Name: LG03
Map Start: 0.00 cM
Map Stop: 101.88 cM
Features by Type:
1 BES-SSR
4
2 Conserved Intron Spanning Region
3 DArT
2 EST-SSR
6
9
15
3 SNP
2
57
16 SSR
16
136 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Chickpea - Hiremath et al. (2011) 1328 loci map - LG03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
C33 SSR 35.57 Chickpea - Nayak_521 loci - LG 3 C33 Winter_published 86.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 C33 Winter 16.97 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 C33 unknown marker 110.30 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 C33 unknown marker 42.00 (cM) Automated name-based View Maps
TR56 SSR 33.14 Chickpea - Radhika_230 loci - LG 1 TR56 SSR 67.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR56 SSR 15.06 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR56 SSR 99.40 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 TR56 SSR 16.37 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR56 Winter_published 61.40 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TR56 SSR 48.91 (cM) Automated name-based View Maps
Tp6849720 SNP 55.32 Chickpea - Thudi_1291 loci - LG 3 Tp6849720 CAPS 38.75 (cM) Automated name-based View Maps
TR2 SSR 54.19 Chickpea - Thudi_1291 loci - LG 3 TR2 SSR 37.96 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR2 SSR 96.20 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TR2 SSR 37.57 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG03 TR2 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 6 TR2 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR2 Winter_published 60.30 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 TR2 SSR 20.34 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG4 TR2 unknown marker 3.50 (cM) Automated name-based View Maps
PGD6 SSR 46.65 Chickpea - Thudi_1291 loci - LG 3 PGD6 Winter 30.21 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 PGD6 unknown marker 105.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 PGD6 Winter_published 84.80 (cM) Automated name-based View Maps
CaM0658 BES-SSR 46.56 Chickpea - 1147 Transcript map(Seq-clone) - LG03 CaM0658 SSR 23.91 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG03 CaM0658 SSR 19.99 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 CaM0658 SSR 48.11 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 9 CaM0658 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 CaM0658 BES-SSR 30.69 (cM) Automated name-based View Maps
ICCeM018 EST-SSR 46.48 Chickpea - 1147 Transcript map(Seq-clone) - LG03 ICCeM018 SSR 23.76 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 ICCeM018 EST-SSR 30.78 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 ICCeM018 EST-SSR 12.80 (cM) Automated name-based View Maps
ICCeM028 EST-SSR 45.66 Chickpea - Thudi_1291 loci - LG 3 ICCeM028 EST-SSR 31.07 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG03 ICCeM028 SSR 23.05 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 ICCeM028 EST-SSR 12.00 (cM) Automated name-based View Maps
STMS10 SSR 39.48 Chickpea - Varshney_168 loci - LG03 STMS10 SSR 18.38 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 STMS10 Winter 22.49 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 STMS10 SSR 49.78 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 STMS10 SSR 70.70 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 STMS10 SSR 88.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 STMS10 SSR 58.50 (cM) Automated name-based View Maps
R3608-3 SSR 38.36 Chickpea - Millan_555 loci - LG 3 R3608-3 Gene Sequence 50.00 (cM) Automated name-based View Maps
STMS14 SSR 38.05 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 STMS14 SSR 42.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 STMS14 Winter 20.81 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 STMS14 SSR 85.70 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 STMS14 SSR 89.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 STMS14 Winter_published 59.40 (cM) Automated name-based View Maps
TR31 SSR 37.70 Chickpea - Radhika_230 loci - LG 1 TR31 SSR 84.90 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TR31 RAPD 47.00 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG03 TR31 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG03 TR31 SSR 70.77 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR31 SSR 21.73 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR31 Winter_published 60.40 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR31 SSR 96.20 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 TR31 SSR 4.60 (cM) Automated name-based View Maps
TA135 SSR 37.31 Chickpea - Varshney_352 loci - LG03 TA135 SSR 37.90 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TA135 RAPD 46.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TA135 SSR 96.20 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG03 TA135 Winter 1.30 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TA135 Winter_published 60.20 (cM) Automated name-based View Maps
STMS28 SSR 36.85 Chickpea - Thudi_1291 loci - LG 3 STMS28 Winter 17.24 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 STMS28 SSR 85.40 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 STMS28 Winter_published 59.90 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 STMS28 SSR 94.60 (cM) Automated name-based View Maps
TS19 SSR 36.05 Chickpea - Millan_555 loci - LG 3 TS19 RAPD 40.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TS19 SSR 49.03 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TS19 SSR 98.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TS19 SSR 46.60 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TS19 Winter_published 23.70 (cM) Automated name-based View Maps
GAA45 SSR 101.88 Chickpea - Nayak_521 loci - LG 3 GAA45 Winter_published 273.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 GAA45 SSR 90.41 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 GAA45 RAPD 103.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 GAA45 SSR 250.40 (cM) Automated name-based View Maps
TA76 SSR 97.14 Chickpea - Thudi_1291 loci - LG 3 TA76 Winter 85.45 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TA76 Winter_published 279.10 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TA76 SSR 243.30 (cM) Automated name-based View Maps
cpPb488939 DArT 87.95 Chickpea - Gujaria_300 loci - LG03 cpPb488939 DArT 58.20 (cM) Automated name-based View Maps
cpPb677322 DArT 81.06 Chickpea - Gujaria_300 loci - LG03 cpPb677322 DArT 51.70 (cM) Automated name-based View Maps
TR26 SSR 79.62 Chickpea - Chickpea_QTL_SNP - 1 TR26 SSR 37.95 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 TR26 SSR 67.72 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TR26 AFLP 86.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TR26 Winter_published 206.50 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TR26 SSR 208.10 (cM) Automated name-based View Maps
cpPb491550 DArT 74.56 Chickpea - Gujaria_300 loci - LG03 cpPb491550 DArT 44.40 (cM) Automated name-based View Maps
CISR108 Conserved Intron Spanning Region 72.11 Chickpea - Gujaria_300 loci - LG03 CISR108 Conserved Intron Spanning Region 41.40 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 CISR108 Conserved Intron Spanning Region 76.07 (cM) Automated name-based View Maps
AGL94 SNP 71.37 Chickpea - Thudi_1291 loci - LG 1 AGL94 COS-SNP 77.27 (cM) Automated name-based View Maps
TA64 SSR 63.86 Chickpea - Thudi_1291 loci - LG 3 TA64 Winter 51.29 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TA64 SSR 113.10 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG03 TA64 SSR 12.60 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 3 TA64 Gene Sequence 66.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 TA64 SSR 164.40 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 TA64 Winter_published 175.60 (cM) Automated name-based View Maps
GA31 SSR 62.25 Chickpea - Millan_555 loci - LG 3 GA31 RAPD 44.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 3 GA31 Winter 48.18 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 3 GA31 SSR 36.90 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 3 GA31 Winter_published 17.20 (cM) Automated name-based View Maps