CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Hiremath_1328 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG04
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
BES-SSR
DArT
EST-SSR
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Hiremath et al. (2011) 1328 loci map [ View Map Set Info ]
Map Name: LG04
Map Start: 0.00 cM
Map Stop: 92.47 cM
Features by Type:
1 BES-SSR
2
2 DArT
2 EST-SSR
5
10
2
11
1 SNP
6
132
14 SSR
67
255 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Chickpea - Hiremath et al. (2011) 1328 loci map - LG04
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TA46 SSR 22.13 Chickpea - Thudi_1291 loci - LG 4 TA46 Winter 89.69 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA46 RAPD 55.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG04 TA46 Winter 64.10 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA46 Winter_published 347.20 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA46 AFLP 84.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG6 TA46 SSR 28.10 (cM) Automated name-based View Maps
STMS24 SSR 24.05 Chickpea - Nayak_521 loci - LG 4 STMS24 Winter_published 343.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 STMS24 Winter 88.51 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 STMS24 SSR 221.60 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 STMS24 RAPD 80.00 (cM) Automated name-based View Maps
STMS26 SSR 36.90 Chickpea - Winter_354 loci - LG 4 STMS26 SSR 114.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 STMS26 Winter 75.96 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 STMS26 Winter_published 270.70 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b STMS26 RAPD 39.00 (cM) Automated name-based View Maps
TS72 SSR 37.31 Chickpea - Winter_354 loci - LG 11 TS72 SSR 18.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TS72 SSR 73.94 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TS72 SSR 118.20 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TS72 Winter_published 273.30 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TS72 SSR 83.50 (cM) Automated name-based View Maps
TA13 SSR 39.75 Chickpea - Millan_555 loci - LG 4 TA13 RAPD 55.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA13 Winter 72.86 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA13 SSR 105.70 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA13 Winter_published 243.60 (cM) Automated name-based View Maps
TR20 SSR 39.85 Chickpea - Varshney_241 loci - LG04 TR20 SSR 37.03 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TR20 Winter_published 243.60 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TR20 SSR 103.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TR20 SSR 76.86 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 TR20 SSR 54.58 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 7 TR20 SSR 2.61 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TR20 RAPD 48.00 (cM) Automated name-based View Maps
TA2 SSR 40.92 Chickpea - Nayak_521 loci - LG 4 TA2 Winter_published 245.40 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA2 unknown marker 52.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 TA2 SSR 71.99 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA2 Winter 72.39 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA2 SSR 109.80 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA2 RAPD 45.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG6 TA2 SSR 0.00 (cM) Automated name-based View Maps
TA146 SSR 41.58 Chickpea - Varshney_168 loci - LG04 TA146 SSR 19.35 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG6 TA146 SSR 44.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA146 Winter 73.24 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TA146 SSR 62.30 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA146 SSR 106.80 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA146 Winter_published 244.10 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 TA146 SSR 77.53 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA146 AFLP 53.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG04 TA146 Winter 53.60 (cM) Automated name-based View Maps
TA72 SSR 42.91 Chickpea - Gujaria_300 loci - LG04 TA72 Winter 51.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TA72 SSR 63.20 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA72 SSR 107.50 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG6 TA72 SSR 44.10 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TA72 Winter_published 244.10 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 TA72 RAPD 54.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA72 Winter 73.06 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA72 RAPD 36.00 (cM) Automated name-based View Maps
GA2 SSR 43.41 Chickpea - Winter_354 loci - LG 4 GA2 SSR 85.40 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 GA2 RAPD 42.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 GA2 Winter_published 193.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 GA2 Winter 49.90 (cM) Automated name-based View Maps
TA130 SSR 44.35 Chickpea - Nayak_521 loci - LG 4 TA130 Winter_published 149.80 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG04 TA130 SSR 36.59 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b TA130 RAPD 28.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA130 Winter 52.51 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 1 TA130 SSR 6.50 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 TA130 SSR 78.30 (cM) Automated name-based View Maps
CaM0507 BES-SSR 48.82 Chickpea - Varshney_241 loci - LG04 CaM0507 SSR 39.67 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 CaM0507 SSR 54.13 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 CaM0507 BES-SSR 60.91 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 CaM0507 SSR 70.07 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 CaM0507 SSR 50.59 (cM) Automated name-based View Maps
cpPb675919 DArT 17.21 Chickpea - Gujaria_300 loci - LG04 cpPb675919 DArT 75.40 (cM) Automated name-based View Maps
cpPb491143 DArT 19.92 Chickpea - Gujaria_300 loci - LG04 cpPb491143 DArT 72.10 (cM) Automated name-based View Maps
ICCeM015 EST-SSR 56.77 Chickpea - Thudi_1291 loci - LG 6 ICCeM015 EST-SSR 63.20 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG06 ICCeM015 SSR 56.10 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG02 ICCeM015 EST-SSR 45.00 (cM) Automated name-based View Maps
CISP5_dcaps SNP 68.53 No other positions
ICCeM036 EST-SSR 79.68 Chickpea - Gujaria_300 loci - LG02 ICCeM036 EST-SSR 10.20 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG06 ICCeM036 SSR 55.85 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 6 ICCeM036 EST-SSR 62.24 (cM) Automated name-based View Maps
GAA47 SSR 80.01 Chickpea - Thudi_1291 loci - LG 4 GAA47 SSR 27.69 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 GAA47 Winter_published 118.00 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG04b GAA47 RAPD 10.00 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 GAA47 RAPD 26.00 (cM) Automated name-based View Maps
GA24 SSR 80.20 Chickpea - Gujaria_300 loci - LG04 GA24 Winter 11.30 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 GA24 Winter_published 118.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 GA24 SSR 62.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 GA24 SSR 110.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 GA24 Winter 27.44 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 GA24 SSR 79.50 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 GA24 RAPD 28.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 GA24 SSR 32.81 (cM) Automated name-based View Maps
STMS11 SSR 80.30 Chickpea - Winter_354 loci - LG 4 STMS11 SSR 62.70 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 STMS11 SSR 78.85 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 STMS11 RAPD 27.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 STMS11 SSR 118.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 STMS11 SSR 29.99 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 STMS11 SSR 82.25 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 STMS11 Winter 27.04 (cM) Automated name-based View Maps