CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Hiremath_1328 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
BES-SSR
DArT
EST-SSR
RAPD
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Hiremath et al. (2011) 1328 loci map [ View Map Set Info ]
Map Name: LG07
Map Start: 0.00 cM
Map Stop: 112.09 cM
Features by Type:
1 BES-SSR
5 DArT
1 EST-SSR
6
5
5
9
2 RAPD
1 SNP
2
59
9 SSR
19
124 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Chickpea - Hiremath et al. (2011) 1328 loci map - LG07
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
STMS6 SSR 51.03 Chickpea - Nayak_521 loci - LG 7 STMS6 Winter_published 55.60 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 STMS6 Winter 103.79 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 9 STMS6 SSR 17.90 (cM) Automated name-based View Maps
TA180 SSR 44.85 Chickpea - Winter_354 loci - LG 5 TA180 SSR 165.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 7 TA180 Winter_published 329.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TA180 Winter 66.68 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 5 TA180 SSR 26.30 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 TA180 SSR 40.28 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 TA180 SSR 37.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG5 TA180 SSR 15.10 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 TA180 SSR 55.80 (cM) Automated name-based View Maps
cpPb677011 DArT 40.51 Chickpea - Gujaria_300 loci - LG07 cpPb677011 DArT 45.30 (cM) Automated name-based View Maps
GAA44 SSR 36.92 Chickpea - Nayak_521 loci - LG 7 GAA44 Winter_published 194.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 5 GAA44 SSR 30.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 GAA44 SSR 64.44 (cM) Automated name-based View Maps
TAA58 SSR 33.98 Chickpea - Winter_354 loci - LG 5 TAA58 SSR 82.40 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG07 TAA58 SSR 16.59 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 7 TAA58 Winter_published 268.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TAA58 Winter 45.59 (cM) Automated name-based View Maps
TA18 SSR 31.83 Chickpea - Nayak_521 loci - LG 7 TA18 Winter_published 276.00 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG5 TA18 SSR 29.80 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 5 TA18 SSR 23.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 TA18 Winter 41.62 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 5 TA18 SSR 96.90 (cM) Automated name-based View Maps
CKaM0013 SNP 26.77 Chickpea - 1147 Transcript map(Seq-clone) - LG07 CKaM0013 SNP 48.63 (cM) Automated name-based View Maps
CaM0598 BES-SSR 19.04 Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 CaM0598 SSR 38.59 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG07 CaM0598 SSR 56.88 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 CaM0598 BES-SSR 47.99 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 CaM0598 SSR 37.31 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 CaM0598 SSR 58.78 (cM) Automated name-based View Maps
cpPb490874 DArT 7.87 Chickpea - Gujaria_300 loci - LG07 cpPb490874 DArT 8.50 (cM) Automated name-based View Maps
cpPb675317 DArT 59.29 Chickpea - Gujaria_300 loci - LG04 cpPb675317 DArT 7.70 (cM) Automated name-based View Maps
cpPb677907 DArT 53.62 Chickpea - Gujaria_300 loci - LG07 cpPb677907 DArT 76.10 (cM) Automated name-based View Maps
OPC11-1 RAPD 52.28 Chickpea - Gujaria_300 loci - LG06 OPC11-1 Winter 17.50 (cM) Automated name-based View Maps
OPS13-3 RAPD 91.96 Chickpea - Gujaria_300 loci - LG06 OPS13-3 Winter 66.30 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 OPS13-3 RAPD 75.00 (cM) Automated name-based View Maps
TA4L-TA199R-3_300 SSR 81.62 Chickpea - Millan_555 loci - LG 4 TA4L-TA199R-3_300 RAPD 33.00 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG06 TA4L-TA199R-3_300 Winter 21.50 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TA4L-TA199R-3_300 Winter 46.14 (cM) Automated name-based View Maps
OPA14-1 SSR 73.22 Chickpea - Millan_555 loci - LG 4 OPA14-1 RAPD 24.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 OPA14-1 RAPD 56.50 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG06 OPA14-1 Winter 29.60 (cM) Automated name-based View Maps
TA4L-TA191R_291-284 SSR 69.48 Chickpea - Thudi_1291 loci - LG 4 TA4L-TA191R_291-284 Winter 27.18 (cM) Automated name-based View Maps
Chickpea - Gujaria_300 loci - LG06 TA4L-TA191R_291-284 Winter 26.40 (cM) Automated name-based View Maps
ICCeM029 EST-SSR 68.96 Chickpea - Gujaria_300 loci - LG07 ICCeM029 EST-SSR 62.60 (cM) Automated name-based View Maps
STMS25 SSR 62.49 Chickpea - Radhika_230 loci - LG 5 STMS25 SSR 36.10 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG07 STMS25 SSR 19.01 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 7 STMS25 Winter 5.90 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 15 STMS25 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG07 STMS25 SSR 42.78 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS25 Winter_published 305.90 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG07 STMS25 SSR 32.15 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG07 STMS25 SSR 64.38 (cM) Automated name-based View Maps
cpPb677096 DArT 2.87 Chickpea - Gujaria_300 loci - LG07 cpPb677096 DArT 2.10 (cM) Automated name-based View Maps