CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Pigeonpea-ICPA 2043 x ICPR 3467
(Reference Set)
Pigeonpea-Consensus
Min.
Correspondences
Align Vertically
Stack
Maps LG11 LG11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
bin1
bin10
bin11
bin12
bin13
bin2
bin3
bin4
bin5
bin6
bin7
bin8
bin9
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pigeonpea - Bohra et al. 2011_ICPA 2043 x ICPR 3467 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 105.70 cM
Features by Type:
7 SSR
7 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 7 of 7.
Pigeonpea - Bohra et al. 2011_ICPA 2043 x ICPR 3467 - LG11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CcM0834 SSR 105.70 Pigeonpea - ICPA 2043 x ICPR 2671 - LG11 CcM0834 SSR 32.37 (cM) Automated name-based View Maps
Pigeonpea - Consensus - LG11 CcM0834 SSR 89.62 (cM) Automated name-based View Maps
CcM2871 SSR 99.22 Pigeonpea - Consensus - LG11 CcM2871 SSR 80.02 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG11 CcM2871 SSR 70.83 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG11 CcM2871 SSR 45.45 (cM) Automated name-based View Maps
CcM2697 SSR 86.82 Pigeonpea - Consensus - LG11 CcM2697 SSR 68.85 (cM) Automated name-based View Maps
CcM2332 SSR 69.31 Pigeonpea - Consensus - LG11 CcM2332 SSR 51.11 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG11 CcM2332 SSR 41.75 (cM) Automated name-based View Maps
CcM1175 SSR 57.18 Pigeonpea - TTB 7 x ICP 7035 - LG11 CcM1175 SSR 0.00 (cM) Automated name-based View Maps
Pigeonpea - Consensus - LG11 CcM1175 SSR 39.42 (cM) Automated name-based View Maps
CcM0353 SSR 29.49 Pigeonpea - Consensus - LG11 CcM0353 SSR 19.48 (cM) Automated name-based View Maps
CcM0381 SSR 0.00 Pigeonpea - Consensus - LG11 CcM0381 SSR 0.00 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG11 CcM0381 SSR 0.00 (cM) Automated name-based View Maps