CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Pigeonpea-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG05
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
bin1
bin2
bin3
bin4
bin5
bin6
bin7
bin8
bin9
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pigeonpea - Bohra et al. 2011_Consensus [ View Map Set Info ]
Map Name: LG05
Map Start: 0.00 cM
Map Stop: 83.76 cM
Features by Type:
1 bin1
1 bin2
1 bin3
1 bin4
1 bin5
1 bin6
1 bin7
1 bin8
1 bin9
23 SSR
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Pigeonpea - Bohra et al. 2011_Consensus - LG05
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CcM2707 SSR 0.00 Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM2707 SSR 0.00 (cM) Automated name-based View Maps
CcM1047 SSR 21.79 Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM1047 SSR 21.17 (cM) Automated name-based View Maps
CcM0721 SSR 29.53 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM0721 SSR 0.00 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM0721 SSR 0.00 (cM) Automated name-based View Maps
CcM1110 SSR 38.06 Pigeonpea - Consensus - LG02 CcM1110 SSR 35.84 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM1110 SSR 6.71 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG02 CcM1110 SSR 31.66 (cM) Automated name-based View Maps
CcM2217 SSR 44.66 Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM2217 SSR 0.00 (cM) Automated name-based View Maps
CcM1139 SSR 47.31 Pigeonpea - ICP 28 x ICPW 94 - LG05 CcM1139 SSR 49.80 (cM) Automated name-based View Maps
Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM1139 SSR 4.64 (cM) Automated name-based View Maps
Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM1139 SSR 26.21 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM1139 SSR 12.76 (cM) Automated name-based View Maps
CcM1146 SSR 49.16 Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM1146 SSR 47.56 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM1146 SSR 17.22 (cM) Automated name-based View Maps
CcM0039 SSR 50.81 Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM0039 SSR 54.14 (cM) Automated name-based View Maps
CcM2228 SSR 52.16 Pigeonpea - ICP 28 x ICPW 94 - LG05 CcM2228 SSR 53.02 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM2228 SSR 54.73 (cM) Automated name-based View Maps
Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM2228 SSR 10.14 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG05 CcM2228 SSR 0.00 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM2228 SSR 19.73 (cM) Automated name-based View Maps
CcM2227 SSR 53.55 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM2227 SSR 32.49 (cM) Automated name-based View Maps
CcM2818 SSR 53.73 Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM2818 SSR 7.92 (cM) Automated name-based View Maps
CcM0322 SSR 55.14 Pigeonpea - ICPA 2039 x ICPR 2447 - LG05 CcM0322 SSR 5.68 (cM) Automated name-based View Maps
CcM0246 SSR 56.14 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM0246 SSR 35.18 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM0246 SSR 24.06 (cM) Automated name-based View Maps
CcM1732 SSR 56.97 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM1732 SSR 35.91 (cM) Automated name-based View Maps
CcM0431 SSR 57.88 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM0431 SSR 36.45 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG05 CcM0431 SSR 9.33 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM0431 SSR 62.34 (cM) Automated name-based View Maps
CcM0922 SSR 61.58 Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM0922 SSR 30.66 (cM) Automated name-based View Maps
CcM2451 SSR 62.44 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM2451 SSR 41.51 (cM) Automated name-based View Maps
CcM0701 SSR 63.59 Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM0701 SSR 15.93 (cM) Automated name-based View Maps
CcM1611 SSR 65.35 Pigeonpea - ICPA 2039 x ICPR 2447 - LG05 CcM1611 SSR 18.13 (cM) Automated name-based View Maps
Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM1611 SSR 17.96 (cM) Automated name-based View Maps
CcM2740 SSR 65.92 Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM2740 SSR 45.55 (cM) Automated name-based View Maps
Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM2740 SSR 18.58 (cM) Automated name-based View Maps
CcM2281 SSR 67.56 Pigeonpea - TTB 7 x ICP 7035 - LG05 CcM2281 SSR 17.76 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM2281 SSR 38.00 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM2281 SSR 64.47 (cM) Automated name-based View Maps
Pigeonpea - ICP 8863 x ICPL 20097 - LG05 CcM2281 SSR 46.80 (cM) Automated name-based View Maps
Pigeonpea - ICP 28 x ICPW 94 - LG05 CcM2281 SSR 56.71 (cM) Automated name-based View Maps
CcM0810 SSR 72.97 Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM0810 SSR 70.86 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2039 x ICPR 2447 - LG05 CcM0810 SSR 24.09 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM0810 SSR 44.41 (cM) Automated name-based View Maps
CcM1105 SSR 83.76 Pigeonpea - ICPA 2043 x ICPR 2671 - LG05 CcM1105 SSR 62.84 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG05 CcM1105 SSR 73.43 (cM) Automated name-based View Maps
Bin5.01 bin1 0.00 - 10.00 No other positions
Bin5.02 bin2 10.00 - 20.00 No other positions