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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Pigeonpea-TTB 7 x ICP 7035
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps LG11
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pigeonpea - Gnanesh et al. 2010_TTB 7 x ICP 7035 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 44.16 cM
Features by Type:
7 SSR
7 Total

Map Features

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Items 1 to 7 of 7.
Pigeonpea - Gnanesh et al. 2010_TTB 7 x ICP 7035 - LG11
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CcM1175 SSR 0.00 Pigeonpea - Consensus - LG11 CcM1175 SSR 39.42 (cM) Automated name-based View Maps
Pigeonpea - ICPA 2043 x ICPR 3467 - LG11 CcM1175 SSR 57.18 (cM) Automated name-based View Maps
CcM0366 SSR 25.05 No other positions
CcM0543 SSR 29.76 No other positions
CcM1772 SSR 35.54 No other positions
CcM0948 SSR 37.24 Pigeonpea - ICP 28 x ICPW 94 - LG08 CcM0948 SSR 83.55 (cM) Automated name-based View Maps
CcM1976 SSR 42.44 No other positions
CcM1406 SSR 44.16 Pigeonpea - ICPB 2049 x ICPL 99050 - LG11 CcM1406 SSR 31.75 (cM) Automated name-based View Maps