CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Gujaria_300 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
CAPS
Conserved Intron Spanning Region
COS-SNP
DArT
EST-SSR
SSR
Winter
Winter_published
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG01
Map Start: 0.00 cM
Map Stop: 95.10 cM
Features by Type:
1 AFLP
4 CAPS
2 Conserved Intron Spanning Region
6 COS-SNP
1 DArT
2 EST-SSR
9 SSR
11 Winter
1 Winter_published
37 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 37.       of 2 | Next
Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 - LG01
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
STMS21 Winter 0.00 Chickpea - Winter_354 loci - LG 1 STMS21 SSR 348.70 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG01 STMS21 SSR 23.18 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 STMS21 Winter 81.57 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 STMS21 SSR 16.57 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 STMS21 Winter_published 392.00 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 STMS21 SSR 23.18 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 1 STMS21 Gene Sequence 31.00 (cM) Automated name-based View Maps
AAMCTA15 AFLP 3.30 Chickpea - Hiremath_1328 loci - LG01 AAMCTA15 SSR 35.81 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 AAMCTA15 AFLP 384.80 (cM) Automated name-based View Maps
OPAB9-1 Winter 5.70 Chickpea - Hiremath_1328 loci - LG01 OPAB9-1 RAPD 30.91 (cM) Automated name-based View Maps
ICCM0289 SSR 16.00 Chickpea - Thudi_1291 loci - LG 1 ICCM0289 SSR 71.59 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ICCM0289 SSR 387.00 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ICCM0289 33.51 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG01 ICCM0289 SSR 30.52 (cM) Automated name-based View Maps
ISSR8842 Winter 16.90 Chickpea - Winter_354 loci - LG 1 ISSR8842 unknown marker 302.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 ISSR8842 Winter 67.75 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ISSR8842 50.79 (cM) Automated name-based View Maps
ACCO COS-SNP 20.20 Chickpea - Thudi_1291 loci - LG 1 ACCO COS-SNP 67.21 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ACCO 45.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ACCO COS-SNP 360.00 (cM) Automated name-based View Maps
cpPb678248 DArT 25.00 Chickpea - Hiremath_1328 loci - LG01 cpPb678248 DArT 44.48 (cM) Automated name-based View Maps
H1H24 SSR 27.40 Chickpea - Hiremath_1328 loci - LG01 H1H24 46.44 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 H1H24 SSR 352.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 H1H24 SSR 61.56 (cM) Automated name-based View Maps
C32 Winter 31.20 Chickpea - Millan_555 loci - LG 1 C32 unknown marker 9.00 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 C32 Winter_published 336.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 C32 Winter 58.38 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 1 C32 unknown marker 290.90 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 C32 SSR 52.17 (cM) Automated name-based View Maps
ISSR8601 Winter 33.70 Chickpea - Thudi_1291 loci - LG 1 ISSR8601 Winter 97.21 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 1 ISSR8601 unknown marker 373.90 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ISSR8601 4.27 (cM) Automated name-based View Maps
CISR008 Conserved Intron Spanning Region 35.30 Chickpea - Hiremath_1328 loci - LG01 CISR008 Conserved Intron Spanning Region 6.16 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 CISR008 Conserved Intron Spanning Region 92.32 (cM) Automated name-based View Maps
DMI1 COS-SNP 40.60 Chickpea - Thudi_1291 loci - LG 1 DMI1 COS-SNP 89.44 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 DMI1 2.92 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 DMI1 COS-SNP 431.10 (cM) Automated name-based View Maps
TC77488 COS-SNP 41.30 Chickpea - Nayak_521 loci - LG 1 TC77488 COS-SNP 102.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TC77488 COS-SNP 40.52 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TC77488 68.77 (cM) Automated name-based View Maps
H3H021 SSR 41.90 Chickpea - Nayak_521 loci - LG 1 H3H021 SSR 104.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 H3H021 66.73 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 H3H021 SSR 42.75 (cM) Automated name-based View Maps
ICCM0297 SSR 43.30 Chickpea - Thudi_1291 loci - LG 1 ICCM0297 SSR 46.79 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 ICCM0297 SSR 63.96 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ICCM0297 SSR 108.10 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG01 ICCM0297 SSR 32.01 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG01 ICCM0297 SSR 56.98 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG01 ICCM0297 SSR 77.94 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ICCM0297 61.95 (cM) Automated name-based View Maps
CGMM042 CAPS 43.70 Chickpea - Hiremath_1328 loci - LG01 CGMM042 59.87 (cM) Automated name-based View Maps
AJ005043 COS-SNP 44.50 Chickpea - Hiremath_1328 loci - LG01 AJ005043 58.67 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 AJ005043 COS-SNP 113.20 (cM) Automated name-based View Maps
CGMM051 CAPS 46.90 Chickpea - Hiremath_1328 loci - LG01 CGMM051 65.64 (cM) Automated name-based View Maps
ICCM0245 SSR 47.10 Chickpea - Thudi_1291 loci - LG 1 ICCM0245 SSR 45.23 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 ICCM0245 SSR 106.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 ICCM0245 64.42 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG01 ICCM0245 SSR 60.22 (cM) Automated name-based View Maps
TA1 Winter 47.50 Chickpea - Winter_354 loci - LG 1 TA1 SSR 123.10 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG01 TA1 SSR 75.83 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG01 TA1 SSR 34.59 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA1 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG7 TA1 SSR 1.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TA1 Winter 45.94 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA1 SSR 62.91 (cM) Automated name-based View Maps
TA8 Winter 47.60 Chickpea - Varshney_168 loci - LG01 TA8 SSR 42.57 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TA8 SSR 62.72 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TA8 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 TA8 SSR 65.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 TA8 Winter 47.53 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 1 TA8 SSR 123.10 (cM) Automated name-based View Maps
TC80236 COS-SNP 48.10 Chickpea - Thudi_1291 loci - LG 1 TC80236 COS-SNP 51.50 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TC80236 57.24 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TC80236 COS-SNP 111.30 (cM) Automated name-based View Maps
H2A08 SSR 49.40 Chickpea - Thudi_1291 loci - LG 1 H2A08 SSR 52.61 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 H2A08 55.57 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 H2A08 SSR 112.60 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG01 H2A08 SSR 63.66 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG01 H2A08 SSR 48.23 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG01 H2A08 SSR 76.97 (cM) Automated name-based View Maps
TR43 SSR 50.10 Chickpea - Thudi_1291 loci - LG 1 TR43 SSR 50.45 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG01 TR43 SSR 63.95 (cM) Automated name-based View Maps
Chickpea - Millan_229 loci - LG01 TR43 RAPD 22.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 1 TR43 SSR 120.20 (cM) Automated name-based View Maps
Chickpea - Vadez et al. Salt tolerance - LG1 TR43 SSR 5.60 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 TR43 SSR 108.50 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 TR43 Winter_published 122.70 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG01 TR43 SSR 41.77 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 2 TR43 SSR 18.57 (cM) Automated name-based View Maps
H1G16 SSR 51.90 Chickpea - Hiremath_1328 loci - LG01 H1G16 67.91 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 1 H1G16 SSR 39.57 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 1 H1G16 SSR 117.80 (cM) Automated name-based View Maps