CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Gujaria_300 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG04
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
CAPS
COS-SNP
DArT
SSR
Winter
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG04
Map Start: 0.00 cM
Map Stop: 84.60 cM
Features by Type:
5 CAPS
11 COS-SNP
3 DArT
15 SSR
4 Winter
38 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 38.       of 2 | Next
Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 - LG04
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC86606 COS-SNP 0.00 Chickpea - Nayak_521 loci - LG 4 TC86606 COS-SNP 32.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TC86606 COS-SNP 18.59 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 TC86606 87.97 (cM) Automated name-based View Maps
HRIP COS-SNP 3.50 Chickpea - Nayak_521 loci - LG 4 HRIP COS-SNP 64.30 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 HRIP 92.01 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 HRIP COS-SNP 18.01 (cM) Automated name-based View Maps
TC76700 COS-SNP 4.00 Chickpea - Hiremath_1328 loci - LG04 TC76700 92.47 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 TC76700 COS-SNP 66.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 TC76700 COS-SNP 20.34 (cM) Automated name-based View Maps
cpPb675317 DArT 7.70 Chickpea - Hiremath_1328 loci - LG07 cpPb675317 DArT 59.29 (cM) Automated name-based View Maps
GA24 Winter 11.30 Chickpea - Hiremath_1328 loci - LG04 GA24 SSR 80.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 GA24 Winter 27.44 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 GA24 SSR 32.81 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 4 GA24 RAPD 28.00 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 GA24 SSR 79.50 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 GA24 Winter_published 118.00 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 4 GA24 SSR 62.70 (cM) Automated name-based View Maps
Chickpea - Radhika_230 loci - LG 2 GA24 SSR 110.80 (cM) Automated name-based View Maps
CGMM002 CAPS 12.20 Chickpea - Hiremath_1328 loci - LG04 CGMM002 84.27 (cM) Automated name-based View Maps
DSI COS-SNP 14.80 Chickpea - Hiremath_1328 loci - LG04 DSI 77.54 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 DSI COS-SNP 103.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 DSI COS-SNP 29.29 (cM) Automated name-based View Maps
CALTL COS-SNP 14.90 Chickpea - Thudi_1291 loci - LG 4 CALTL COS-SNP 29.46 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 CALTL 78.24 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 CALTL COS-SNP 81.60 (cM) Automated name-based View Maps
CGMM044 CAPS 18.10 Chickpea - Hiremath_1328 loci - LG04 CGMM044 76.54 (cM) Automated name-based View Maps
REP COS-SNP 22.00 Chickpea - Hiremath_1328 loci - LG04 REP 70.48 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 REP COS-SNP 121.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 REP COS-SNP 32.48 (cM) Automated name-based View Maps
ICCM0293 SSR 25.00 Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0293 SSR 31.30 (cM) Automated name-based View Maps
Chickpea - Pushpavalli_56_loci - CaLG04d ICCM0293 SSR 0.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0293 SSR 32.21 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 ICCM0293 69.74 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0293 SSR 113.80 (cM) Automated name-based View Maps
RL3 COS-SNP 27.10 Chickpea - Thudi_1291 loci - LG 4 RL3 COS-SNP 42.79 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 RL3 66.08 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 RL3 COS-SNP 127.70 (cM) Automated name-based View Maps
CGMM036 CAPS 28.10 Chickpea - Hiremath_1328 loci - LG04 CGMM036 68.11 (cM) Automated name-based View Maps
ICCM0004 SSR 32.10 Chickpea - Hiremath_1328 loci - LG04 ICCM0004 65.34 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0004 SSR 48.68 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0004 SSR 140.60 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0004 SSR 38.13 (cM) Automated name-based View Maps
ICCM0003 SSR 32.20 Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0003 SSR 38.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0003 SSR 48.82 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0003 SSR 140.60 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 ICCM0003 65.14 (cM) Automated name-based View Maps
ICCM0024 SSR 32.60 Chickpea - Hiremath_1328 loci - LG04 ICCM0024 68.78 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0024 SSR 50.51 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0024 SSR 35.09 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0024 SSR 136.10 (cM) Automated name-based View Maps
ICCM0063 SSR 35.80 Chickpea - Hiremath_1328 loci - LG04 ICCM0063 58.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0063 SSR 53.46 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0063 SSR 44.33 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0063 SSR 155.10 (cM) Automated name-based View Maps
ICCM0249 SSR 36.00 Chickpea - Hiremath_1328 loci - LG04 ICCM0249 50.24 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 ICCM0249 SSR 57.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0249 SSR 53.57 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 ICCM0249 SSR 54.53 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0249 SSR 44.32 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0249 SSR 155.10 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG04 ICCM0249 SSR 34.79 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 ICCM0249 SSR 64.46 (cM) Automated name-based View Maps
ICCM0127 SSR 41.60 Chickpea - Hiremath_1328 loci - LG04 ICCM0127 49.77 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0127 SSR 211.80 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0127 SSR 52.57 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0127 SSR 58.84 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 3 ICCM0127 SSR 15.73 (cM) Automated name-based View Maps
tk CAPS 41.70 No other positions
H1H15 SSR 42.50 Chickpea - Hiremath_1328 loci - LG04 H1H15 55.22 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 H1H15 SSR 212.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 H1H15 SSR 60.31 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 7 H1H15 SSR 11.36 (cM) Automated name-based View Maps
H1H13 SSR 42.50 Chickpea - Varshney_168 loci - LG04 H1H13 SSR 23.84 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 H1H13 SSR 212.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 H1H13 SSR 60.26 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 H1H13 49.09 (cM) Automated name-based View Maps
ICCM0068 SSR 43.00 Chickpea - Hiremath_1328 loci - LG04 ICCM0068 51.64 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 ICCM0068 SSR 282.20 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 ICCM0068 SSR 61.20 (cM) Automated name-based View Maps
Chickpea - Varshney_352 loci - LG04 ICCM0068 SSR 71.75 (cM) Automated name-based View Maps
Chickpea - Varshney_168 loci - LG04 ICCM0068 SSR 23.76 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 7 ICCM0068 SSR 9.54 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 ICCM0068 SSR 52.01 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 ICCM0068 SSR 38.45 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG04 ICCM0068 SSR 52.02 (cM) Automated name-based View Maps
H1G20 SSR 43.10 Chickpea - Nayak_521 loci - LG 4 H1G20 SSR 212.90 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 7 H1G20 SSR 3.78 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 H1G20 49.11 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 H1G20 SSR 61.05 (cM) Automated name-based View Maps
H1B17 SSR 43.90 Chickpea - Varshney_168 loci - LG04 H1B17 SSR 23.74 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 4 H1B17 SSR 62.11 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 4 H1B17 SSR 212.90 (cM) Automated name-based View Maps
Chickpea - Varshney_241 loci - LG04 H1B17 SSR 37.99 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG04 H1B17 48.41 (cM) Automated name-based View Maps
Chickpea - Chickpea_QTL_SNP - 7 H1B17 SSR 6.08 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG04 H1B17 SSR 52.59 (cM) Automated name-based View Maps