CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-Gujaria_300 loci
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG05
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
Conserved Intron Spanning Region
COS-SNP
DArT
SSR
Winter
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 [ View Map Set Info ]
Map Name: LG05
Map Start: 0.00 cM
Map Stop: 88.20 cM
Features by Type:
3 CAPS
4 Conserved Intron Spanning Region
5 COS-SNP
5 DArT
14 SSR
5 Winter
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Chickpea - Gujaria et al. 2011_ICC 4958 × PI 489777 - LG05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
cpPb326684 DArT 0.00 Chickpea - Hiremath_1328 loci - LG05 cpPb326684 DArT 7.58 (cM) Automated name-based View Maps
CGMM023 CAPS 3.60 Chickpea - Hiremath_1328 loci - LG05 CGMM023 0.00 (cM) Automated name-based View Maps
STMS20 Winter 6.30 Chickpea - Hiremath_1328 loci - LG05 STMS20 SSR 10.46 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 STMS20 SSR 18.90 (cM) Automated name-based View Maps
Chickpea - Millan_555 loci - LG 5 STMS20 AFLP 28.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 STMS20 Winter 1.02 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS20 Winter_published 381.50 (cM) Automated name-based View Maps
STMS8 Winter 9.50 Chickpea - Thudi_1291 loci - LG 5 STMS8 Winter 9.14 (cM) Automated name-based View Maps
Chickpea - Winter_354 loci - LG 7 STMS8 SSR 25.10 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 STMS8 SSR 11.92 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 STMS8 Winter_published 14.80 (cM) Automated name-based View Maps
AIGP COS-SNP 12.80 Chickpea - Hiremath_1328 loci - LG05 AIGP 17.52 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 AIGP COS-SNP 15.58 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 AIGP COS-SNP 383.40 (cM) Automated name-based View Maps
cpPb488668 DArT 17.90 Chickpea - Hiremath_1328 loci - LG05 cpPb488668 DArT 23.67 (cM) Automated name-based View Maps
CGMM038 CAPS 22.50 Chickpea - Hiremath_1328 loci - LG05 CGMM038 12.91 (cM) Automated name-based View Maps
MSU83 COS-SNP 28.80 Chickpea - Nayak_521 loci - LG 5 MSU83 COS-SNP 367.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 MSU83 COS-SNP 32.38 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 MSU83 31.19 (cM) Automated name-based View Maps
AF457590 COS-SNP 32.00 Chickpea - Hiremath_1328 loci - LG05 AF457590 34.48 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 AF457590 COS-SNP 365.30 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 AF457590 COS-SNP 35.12 (cM) Automated name-based View Maps
cpPb489565 DArT 36.00 Chickpea - Hiremath_1328 loci - LG05 cpPb489565 DArT 39.72 (cM) Automated name-based View Maps
CISR022 Conserved Intron Spanning Region 41.70 Chickpea - Hiremath_1328 loci - LG05 CISR022 Conserved Intron Spanning Region 42.51 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 CISR022 Conserved Intron Spanning Region 45.29 (cM) Automated name-based View Maps
cpPb675429 DArT 46.80 Chickpea - Hiremath_1328 loci - LG05 cpPb675429 DArT 47.26 (cM) Automated name-based View Maps
ICCM0205 SSR 50.20 Chickpea - Hiremath_1328 loci - LG05 ICCM0205 48.43 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 ICCM0205 SSR 54.17 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG05 ICCM0205 SSR 77.92 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 ICCM0205 SSR 62.10 (cM) Automated name-based View Maps
TC80362 COS-SNP 53.10 Chickpea - Nayak_521 loci - LG 5 TC80362 COS-SNP 63.70 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 TC80362 COS-SNP 57.56 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TC80362 48.75 (cM) Automated name-based View Maps
ICCM0120b SSR 55.70 Chickpea - Thudi_1291 loci - LG 5 ICCM0120b SSR 60.43 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG05 ICCM0120b SSR 75.11 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 ICCM0120b 51.97 (cM) Automated name-based View Maps
CISR016 Conserved Intron Spanning Region 58.40 Chickpea - Hiremath_1328 loci - LG05 CISR016 Conserved Intron Spanning Region 57.10 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 CISR016 Conserved Intron Spanning Region 62.61 (cM) Automated name-based View Maps
CISR027 Conserved Intron Spanning Region 58.70 Chickpea - Thudi_1291 loci - LG 5 CISR027 Conserved Intron Spanning Region 62.05 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 CISR027 Conserved Intron Spanning Region 56.89 (cM) Automated name-based View Maps
cpPb350493 DArT 62.60 Chickpea - Hiremath_1328 loci - LG05 cpPb350493 DArT 62.97 (cM) Automated name-based View Maps
CGMM050 CAPS 68.90 Chickpea - Hiremath_1328 loci - LG05 CGMM050 87.14 (cM) Automated name-based View Maps
TCMO COS-SNP 71.50 Chickpea - Thudi_1291 loci - LG 5 TCMO COS-SNP 77.54 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 TCMO COS-SNP 136.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 TCMO 75.02 (cM) Automated name-based View Maps
ICCM0081 SSR 72.30 Chickpea - Hiremath_1328 loci - LG05 ICCM0081 78.59 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 ICCM0081 SSR 192.00 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 ICCM0081 SSR 84.65 (cM) Automated name-based View Maps
Chickpea - 1147 Transcript map(Seq-clone) - LG05 ICCM0081 SSR 51.93 (cM) Automated name-based View Maps
H4H11 SSR 75.20 Chickpea - Nayak_521 loci - LG 5 H4H11 SSR 161.80 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 H4H11 SSR 82.23 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 H4H11 75.92 (cM) Automated name-based View Maps
H4F07 SSR 75.60 Chickpea - Nayak_521 loci - LG 5 H4F07 SSR 202.70 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 H4F07 77.55 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 H4F07 SSR 82.53 (cM) Automated name-based View Maps
H2B202 SSR 76.10 Chickpea - Nayak_521 loci - LG 5 H2B202 SSR 149.90 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 H2B202 SSR 81.65 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 H2B202 75.84 (cM) Automated name-based View Maps
H2L102 SSR 76.10 Chickpea - Chickpea_QTL_SNP - 5 H2L102 SSR 15.40 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG05 H2L102 76.48 (cM) Automated name-based View Maps
Chickpea - Nayak_521 loci - LG 5 H2L102 SSR 161.40 (cM) Automated name-based View Maps
Chickpea - Jaganathan_GBS-SNP_1007 loci - CaLG05 H2L102 SSR 13.29 (cM) Automated name-based View Maps
Chickpea - Thudi_1291 loci - LG 5 H2L102 SSR 81.92 (cM) Automated name-based View Maps