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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-1147 Transcript map(Seq-clone)
(Reference Set)
Min.
Correspondences
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Maps LG06
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
COS-SNP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Transcript map with 1147 loci [ View Map Set Info ]
Map Name: LG06
Map Start: 0.00 cM
Map Stop: 94.92 cM
Features by Type:
4 CAPS
54 COS-SNP
86 SNP
37 SSR
181 Total

Map Features

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Items 1 to 25 of 181.       of 8 | Next
Chickpea - Transcript map with 1147 loci - LG06
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CKaM0010 SNP 0.00 Chickpea - Hiremath_1328 loci - LG06 CKaM0010 41.10 (cM) Automated name-based View Maps
CKaM1477 SNP 2.17 Chickpea - Hiremath_1328 loci - LG06 CKaM1477 28.94 (cM) Automated name-based View Maps
CKaM1290 SNP 3.26 Chickpea - Hiremath_1328 loci - LG06 CKaM1290 27.93 (cM) Automated name-based View Maps
CKaM1334 SNP 3.36 Chickpea - Hiremath_1328 loci - LG06 CKaM1334 27.98 (cM) Automated name-based View Maps
CKaM0867 SNP 6.41 Chickpea - Hiremath_1328 loci - LG06 CKaM0867 31.97 (cM) Automated name-based View Maps
CKaM1408 SNP 6.70 Chickpea - Hiremath_1328 loci - LG06 CKaM1408 32.28 (cM) Automated name-based View Maps
CKaM0848 SNP 6.72 Chickpea - Hiremath_1328 loci - LG06 CKaM0848 32.24 (cM) Automated name-based View Maps
CKaM1195 SNP 6.74 Chickpea - Hiremath_1328 loci - LG06 CKaM1195 32.24 (cM) Automated name-based View Maps
CKaM1715 SNP 7.07 Chickpea - Hiremath_1328 loci - LG06 CKaM1715 31.69 (cM) Automated name-based View Maps
CKaM1920 SNP 7.09 Chickpea - Hiremath_1328 loci - LG06 CKaM1920 30.91 (cM) Automated name-based View Maps
TOG897528 COS-SNP 9.06 Chickpea - Hiremath_1328 loci - LG06 TOG897528 22.70 (cM) Automated name-based View Maps
CKaM0332 SNP 9.55 Chickpea - Hiremath_1328 loci - LG06 CKaM0332 29.78 (cM) Automated name-based View Maps
CKaM0695 SNP 11.61 Chickpea - Hiremath_1328 loci - LG06 CKaM0695 31.97 (cM) Automated name-based View Maps
TOG898284 COS-SNP 24.38 Chickpea - Hiremath_1328 loci - LG06 TOG898284 0.00 (cM) Automated name-based View Maps
CKaM0626 SNP 25.60 Chickpea - Hiremath_1328 loci - LG06 CKaM0626 2.57 (cM) Automated name-based View Maps
TOG906822 COS-SNP 26.88 Chickpea - Hiremath_1328 loci - LG06 TOG906822 42.15 (cM) Automated name-based View Maps
CKaM0967 SNP 28.85 Chickpea - Hiremath_1328 loci - LG06 CKaM0967 2.95 (cM) Automated name-based View Maps
CKaM1041 SNP 29.12 Chickpea - Hiremath_1328 loci - LG06 CKaM1041 3.42 (cM) Automated name-based View Maps
CKaM1629 SNP 29.15 Chickpea - Hiremath_1328 loci - LG06 CKaM1629 3.42 (cM) Automated name-based View Maps
CKaM0775 SNP 29.15 Chickpea - Hiremath_1328 loci - LG06 CKaM0775 3.42 (cM) Automated name-based View Maps
CKaM1403 SNP 29.17 Chickpea - Hiremath_1328 loci - LG06 CKaM1403 3.45 (cM) Automated name-based View Maps
CKaM1921 SNP 29.19 Chickpea - Hiremath_1328 loci - LG06 CKaM1921 3.46 (cM) Automated name-based View Maps
CKaM1758 SNP 29.27 Chickpea - Hiremath_1328 loci - LG06 CKaM1758 3.34 (cM) Automated name-based View Maps
CKaM1825 SNP 29.40 Chickpea - Hiremath_1328 loci - LG06 CKaM1825 3.40 (cM) Automated name-based View Maps
CKaM1347 SNP 30.10 Chickpea - Hiremath_1328 loci - LG06 CKaM1347 4.35 (cM) Automated name-based View Maps