CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Chickpea-1147 Transcript map(Seq-clone)
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
COS-SNP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Chickpea - Transcript map with 1147 loci [ View Map Set Info ]
Map Name: LG07
Map Start: 0.00 cM
Map Stop: 92.13 cM
Features by Type:
3 CAPS
19 COS-SNP
58 SNP
20 SSR
100 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 100.       of 4 | Next
Chickpea - Transcript map with 1147 loci - LG07
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gm2118543 CAPS 0.00 Chickpea - Thudi_1291 loci - LG 7 Gm2118543 CAPS 101.28 (cM) Automated name-based View Maps
CKaM0366 SNP 1.36 Chickpea - Hiremath_1328 loci - LG07 CKaM0366 57.15 (cM) Automated name-based View Maps
TOG905371 COS-SNP 1.66 Chickpea - Hiremath_1328 loci - LG07 TOG905371 58.88 (cM) Automated name-based View Maps
CKaM0460 SNP 2.04 Chickpea - Hiremath_1328 loci - LG07 CKaM0460 57.60 (cM) Automated name-based View Maps
TC87800 CAPS 2.04 Chickpea - Thudi_1291 loci - LG 7 TC87800 Winter 100.19 (cM) Automated name-based View Maps
Chickpea - Hiremath_1328 loci - LG07 TC87800 53.62 (cM) Automated name-based View Maps
TOG946834 COS-SNP 2.04 Chickpea - Hiremath_1328 loci - LG07 TOG946834 59.20 (cM) Automated name-based View Maps
CKaM0610 SNP 3.49 Chickpea - Hiremath_1328 loci - LG07 CKaM0610 59.62 (cM) Automated name-based View Maps
CKaM1990 SNP 4.60 Chickpea - Hiremath_1328 loci - LG07 CKaM1990 56.58 (cM) Automated name-based View Maps
CKaM1058 SNP 4.61 Chickpea - Hiremath_1328 loci - LG07 CKaM1058 56.64 (cM) Automated name-based View Maps
CKaM1960 SNP 5.25 Chickpea - Hiremath_1328 loci - LG07 CKaM1960 57.20 (cM) Automated name-based View Maps
CKaM1543 SNP 5.27 Chickpea - Hiremath_1328 loci - LG07 CKaM1543 57.22 (cM) Automated name-based View Maps
CKaM0795 SNP 5.28 Chickpea - Hiremath_1328 loci - LG07 CKaM0795 57.10 (cM) Automated name-based View Maps
CKaM0842 SNP 5.34 Chickpea - Hiremath_1328 loci - LG07 CKaM0842 57.14 (cM) Automated name-based View Maps
CKaM1828 SNP 5.65 Chickpea - Hiremath_1328 loci - LG07 CKaM1828 57.70 (cM) Automated name-based View Maps
CKaM0854 SNP 5.66 Chickpea - Hiremath_1328 loci - LG07 CKaM0854 57.65 (cM) Automated name-based View Maps
CKaM1748 SNP 5.66 Chickpea - Hiremath_1328 loci - LG07 CKaM1748 57.71 (cM) Automated name-based View Maps
CKaM1529 SNP 5.68 Chickpea - Hiremath_1328 loci - LG07 CKaM1529 57.66 (cM) Automated name-based View Maps
CKaM1498 SNP 5.82 Chickpea - Hiremath_1328 loci - LG07 CKaM1498 57.67 (cM) Automated name-based View Maps
CKaM1693 SNP 7.00 Chickpea - Hiremath_1328 loci - LG07 CKaM1693 58.90 (cM) Automated name-based View Maps
CKaM0910 SNP 7.01 Chickpea - Hiremath_1328 loci - LG07 CKaM0910 58.94 (cM) Automated name-based View Maps
CKaM1181 SNP 7.02 Chickpea - Hiremath_1328 loci - LG07 CKaM1181 58.89 (cM) Automated name-based View Maps
CKaM1303 SNP 7.12 Chickpea - Hiremath_1328 loci - LG07 CKaM1303 59.00 (cM) Automated name-based View Maps
CKaM1662 SNP 7.19 Chickpea - Hiremath_1328 loci - LG07 CKaM1662 58.92 (cM) Automated name-based View Maps
CKaM0837 SNP 7.31 Chickpea - Hiremath_1328 loci - LG07 CKaM0837 58.90 (cM) Automated name-based View Maps
CKaM1304 SNP 7.59 Chickpea - Hiremath_1328 loci - LG07 CKaM1304 59.59 (cM) Automated name-based View Maps