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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-Consensus_Abiotic
(Reference Set)
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Maps LG16
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Highlight Features:
Feature Types:
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Correspondence
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Same Scale:
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Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
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Sanity Check:
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - Consensus_Abiotic [ View Map Set Info ]
Map Name: LG16
Map Start: 0.00 cM
Map Stop: 51.14 cM
Features by Type:
10 SSR
10 Total

Map Features

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Items 1 to 10 of 10.
Groundnut - Consensus_Abiotic - LG16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2050 SSR 0.00 Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM2050 SSR 51.10 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG09 GM2050 SSR 51.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM2050 SSR 144.25 (cM) Automated name-based, Automated name-based View Maps
GM1901 SSR 2.21 Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM1901 SSR 47.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 GM1901 SSR 46.56 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1901 SSR 47.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG08 GM1901 SSR 53.90 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
RN34A10 SSR 5.00 Groundnut - Ref. consensus genetic map - a07 RN34A10 SSR 87.87 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 RN34A10 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 RN34A10 SSR 56.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 RN34A10 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG09 RN34A10 SSR 56.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
PM85 SSR 15.20 Groundnut - RIL-1 - RIL-1_LG16 PM85 SSR 24.30 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG09 PM85 SSR 66.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 PM85 SSR 131.08 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 PM85 SSR 66.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 PM85 SSR 24.30 (cM) Automated name-based View Maps
GM1990 SSR 26.92 Groundnut - RIL-9 - RIL-9_LG07 GM1990 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1990 SSR 169.52 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1990 SSR 30.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1990 SSR 23.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
seq3B08 SSR 28.26 Groundnut - Ref. consensus genetic map - a07 seq3B08 SSR 117.58 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG16 seq3B08 SSR 10.80 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - BC-1_a07 seq3B08 SSR 35.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 seq3B08 SSR 10.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-9_LG7 seq3B08 SSR 0.00 (cM) Automated name-based View Maps
GM1922 SSR 31.86 Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM1922 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1922 SSR 18.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1922 SSR 167.42 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1922 SSR 27.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 GM1922 SSR 7.20 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG16 GM1922 SSR 7.20 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG09 GM1922 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 GM1922 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1937 SSR 32.06 Groundnut - combined_corresponding_a07 - RIL-1_LG16 GM1937 SSR 6.90 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1937 SSR 18.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG16 GM1937 SSR 6.90 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1937 SSR 27.90 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 GM1937 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1937 SSR 111.26 (cM) Automated name-based, Automated name-based View Maps
GM1494 SSR 38.96 Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1494 SSR 19.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM1494 SSR 85.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1494 SSR 105.47 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 GM1494 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 GM1494 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG09 GM1494 SSR 85.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG16 GM1494 SSR 0.00 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
GM2425 SSR 51.14 Groundnut - RIL-2 - RIL-2_LG16 GM2425 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b06 GM2425 SSR 79.99 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG10 GM2425 SSR 10.09 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-4_LG10 GM2425 SSR 20.60 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG10 GM2425 SSR 20.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps