CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-Consensus_Biotic
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG13
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - Consensus_Biotic [ View Map Set Info ]
Map Name: LG13
Map Start: 0.00 cM
Map Stop: 85.65 cM
Features by Type:
11 SSR
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Groundnut - Consensus_Biotic - LG13
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC5D06 SSR 0.00 Groundnut - RIL-10 - RIL-10_LG09 TC5D06 SSR 46.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-2_LG13 TC5D06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 TC5D06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-9_LG9 TC5D06 SSR 39.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-3_LG12 TC5D06 SSR 50.60 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 TC5D06 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG13 TC5D06 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 TC5D06 SSR 33.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 TC5D06 SSR 33.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 TC5D06 SSR 69.56 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 TC5D06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 TC5D06 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC5D06 SSR 37.72 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - BC-1_a09 TC5D06 SSR 24.90 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG12 TC5D06 SSR 50.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG09 TC5D06 SSR 53.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-10_LG9 TC5D06 SSR 7.50 (cM) Automated name-based View Maps
GM1911 SSR 11.32 Groundnut - RIL-4 - RIL-4_LG13 GM1911 SSR 18.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 GM1911 SSR 60.19 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 GM1911 SSR 18.00 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG09 GM1911 SSR 53.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 GM1911 SSR 53.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-10_LG9 GM1911 SSR 22.80 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG12 GM1911 SSR 41.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 GM1911 SSR 33.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 GM1911 SSR 33.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 GM1911 SSR 53.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-3_LG12 GM1911 SSR 41.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 GM1911 SSR 53.00 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
seq17E03 SSR 17.38 Groundnut - combined_corresponding_a09 - RIL-7_LG14 seq17E03 SSR 4.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-6_LG14 seq17E03 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq17E03 SSR 63.07 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - BC-1_a09 seq17E03 SSR 41.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 seq17E03 SSR 27.20 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 seq17E03 SSR 27.20 (cM) Automated name-based View Maps
TC9B07 SSR 20.26 Groundnut - combined_corresponding_a09 - RIL-5_LG13 TC9B07 SSR 74.80 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 TC9B07 SSR 53.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - BC-1_a09 TC9B07 SSR 42.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC9B07 SSR 80.13 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 TC9B07 SSR 53.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 TC9B07 SSR 53.10 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 TC9B07 SSR 74.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
TC1D02 SSR 23.45 Groundnut - RIL-10 - RIL-10_LG09 TC1D02 SSR 22.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC1D02 SSR 69.50 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG14 TC1D02 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 TC1D02 SSR 53.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG04 TC1D02 SSR 188.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 TC1D02 SSR 53.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 TC1D02 SSR 210.57 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-9_LG9 TC1D02 SSR 16.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-7_LG14 TC1D02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 TC1D02 SSR 32.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b09 TC1D02 SSR 35.19 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG14 TC1D02 SSR 8.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 TC1D02 SSR 32.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - BC-1_a09 TC1D02 SSR 39.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-6_LG14 TC1D02 SSR 9.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b09 - BC-1_b09 TC1D02 SSR 26.60 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG04 TC1D02 SSR 150.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2259 SSR 33.02 Groundnut - Ref. consensus genetic map - a09 GM2259 SSR 188.32 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG12 GM2259 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 GM2259 SSR 59.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 GM2259 SSR 166.19 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG19 GM2259 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 GM2259 SSR 88.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-3_LG12 GM2259 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 GM2259 SSR 178.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 GM2259 SSR 178.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 GM2259 SSR 59.50 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 GM2259 SSR 88.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq18G01 SSR 42.01 Groundnut - Ref. consensus genetic map - b06 seq18G01 SSR 5.36 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 seq18G01 SSR 223.70 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 seq18G01 SSR 222.00 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b06 - BC-1_b06 seq18G01 SSR 40.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 seq18G01 SSR 70.90 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 seq18G01 SSR 106.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-6_LG6 seq18G01 SSR 89.60 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG05 seq18G01 SSR 84.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a06 - BC-1_a06 seq18G01 SSR 25.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-1_LG5 seq18G01 SSR 84.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 seq18G01 SSR 106.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-8_LG6 seq18G01 SSR 37.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq18G01 SSR 203.17 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a05 seq18G01 SSR 232.63 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 seq18G01 SSR 70.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq19B01 SSR 49.01 Groundnut - combined_corresponding_a09 - RIL-2_LG13 seq19B01 SSR 96.80 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 seq19B01 SSR 122.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG13 seq19B01 SSR 96.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq19B01 SSR 220.22 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 seq19B01 SSR 174.89 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 seq19B01 SSR 88.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 seq19B01 SSR 88.80 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 seq19B01 SSR 186.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 seq19B01 SSR 186.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 seq19B01 SSR 122.70 (cM) Automated name-based View Maps
GM2407 SSR 59.06 Groundnut - RIL-5 - RIL-5_LG13 GM2407 SSR 138.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 GM2407 SSR 234.92 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-2_LG8 GM2407 SSR 155.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG10 GM2407 SSR 132.87 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 GM2407 SSR 138.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 GM2407 SSR 143.93 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 GM2407 SSR 102.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG08 GM2407 SSR 155.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 GM2407 SSR 102.90 (cM) Automated name-based View Maps
TC3E02 SSR 73.86 Groundnut - combined_corresponding_b03 - RIL-6_LG4 TC3E02 SSR 88.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a03 - BC-1_a03 TC3E02 SSR 57.40 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG13 TC3E02 SSR 127.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC3E02 SSR 251.62 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG04 TC3E02 SSR 56.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 TC3E02 SSR 156.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-10_LG13 TC3E02 SSR 111.96 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG13 TC3E02 SSR 232.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 TC3E02 SSR 117.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG13 TC3E02 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG12 TC3E02 SSR 13.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - BC-1_b11 TC3E02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 TC3E02 SSR 156.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 TC3E02 SSR 220.39 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 TC3E02 SSR 232.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 TC3E02 SSR 10.15 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 TC3E02 SSR 117.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 TC3E02 SSR 76.29 (cM) Automated name-based, Automated name-based View Maps
GM1609 SSR 85.65 Groundnut - RIL-1 - RIL-1_LG13 GM1609 SSR 248.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 GM1609 SSR 169.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 GM1609 SSR 169.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 GM1609 SSR 236.19 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-1_LG13 GM1609 SSR 248.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 GM1609 SSR 267.42 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG13 GM1609 SSR 8.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps