CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-Consensus_Biotic
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG14
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - Consensus_Biotic [ View Map Set Info ]
Map Name: LG14
Map Start: 0.00 cM
Map Stop: 72.14 cM
Features by Type:
14 SSR
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Groundnut - Consensus_Biotic - LG14
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2687 SSR 0.00 Groundnut - combined_corresponding_b03 - RIL-1_LG14 GM2687 SSR 33.30 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG14 GM2687 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG14 GM2687 SSR 33.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG14 GM2687 SSR 33.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 GM2687 SSR 236.14 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM2687 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1162 SSR 9.84 Groundnut - RIL-4 - RIL-4_LG14 GM1162 SSR 34.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG14 GM1162 SSR 50.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1386 SSR 19.62 Groundnut - RIL-5 - RIL-5_LG14 GM1386 SSR 29.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM1386 SSR 15.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1021 SSR 22.70 Groundnut - RIL-2 - RIL-2_LG15 GM1021 SSR 52.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG19 GM1021 SSR 102.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG14 GM1021 SSR 59.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM1021 SSR 51.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2730 SSR 32.00 Groundnut - RIL-5 - RIL-5_LG14 GM2730 SSR 74.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM2730 SSR 73.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1740 SSR 36.06 Groundnut - RIL-5 - RIL-5_LG14 GM1740 SSR 100.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM1740 SSR 98.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1572 SSR 37.40 Groundnut - RIL-5 - RIL-5_LG14 GM1572 SSR 111.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM955 SSR 39.42 Groundnut - Ref. consensus genetic map - a04 GM955 SSR 58.69 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG14 GM955 SSR 208.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG07 GM955 SSR 42.61 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-3_LG7 GM955 SSR 44.70 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG07 GM955 SSR 44.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG17 GM955 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-2_LG17 GM955 SSR 0.00 (cM) Automated name-based View Maps
GM1846 SSR 44.34 Groundnut - RIL-4 - RIL-4_LG14 GM1846 SSR 118.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq16C06 SSR 45.93 Groundnut - combined_corresponding_b03 - RIL-1_LG14 seq16C06 SSR 55.40 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG14 seq16C06 SSR 136.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG14 seq16C06 SSR 55.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG14 seq16C06 SSR 55.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 seq16C06 SSR 207.38 (cM) Automated name-based, Automated name-based View Maps
GM840 SSR 50.58 Groundnut - RIL-5 - RIL-5_LG14 GM840 SSR 191.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM840 SSR 174.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1734 SSR 52.04 Groundnut - RIL-5 - RIL-5_LG14 GM1734 SSR 151.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1773 SSR 64.83 Groundnut - RIL-5 - RIL-5_LG14 GM1773 SSR 172.60 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG14 GM1773 SSR 158.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM912 SSR 72.14 Groundnut - RIL-4 - RIL-4_LG14 GM912 SSR 192.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps