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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-RIL-1
(Reference Set)
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Correspondences
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Maps RIL-1_LG17
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
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SSR
Other
 
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Features:
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
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Ignore Image Map
Sanity Check:
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-1 [ View Map Set Info ]
Map Name: RIL-1_LG17
Map Start: 0.00 cM
Map Stop: 34.30 cM
Features by Type:
4 SSR
4 Total

Map Features

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Items 1 to 4 of 4.
Groundnut - RIL-1 - RIL-1_LG17
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1418 SSR 0.00 Groundnut - Consensus_Abiotic - LG17 GM1418 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
IPAHM105 SSR 22.50 Groundnut - Consensus_Biotic - LG17 IPAHM105 SSR 11.07 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG17 IPAHM105 SSR 22.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 IPAHM105 SSR 113.50 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-9_LG14 IPAHM105 SSR 13.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-5_LG17 IPAHM105 SSR 55.80 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG17 IPAHM105 SSR 55.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG04 IPAHM105 SSR 36.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a04 IPAHM105 SSR 45.64 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG14 IPAHM105 SSR 13.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-9_LG4 IPAHM105 SSR 27.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-10_LG4 IPAHM105 SSR 11.30 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG04 IPAHM105 SSR 38.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
IPAHM108A SSR 26.80 Groundnut - Consensus_Abiotic - LG17 IPAHM108A SSR 26.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
S11 SSR 34.30 Groundnut - Ref. consensus genetic map - b04 S11 SSR 47.01 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG17 S11 SSR 34.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG01 S11 SSR 9.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-3_LG1 S11 SSR 9.70 (cM) Automated name-based View Maps