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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-1
(Reference Set)
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Correspondences
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Maps RIL-1_LG21
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-1 [ View Map Set Info ]
Map Name: RIL-1_LG21
Map Start: 0.00 cM
Map Stop: 51.50 cM
Features by Type:
3 SSR
3 Total

Map Features

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Items 1 to 3 of 3.
Groundnut - RIL-1 - RIL-1_LG21
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq19D09 SSR 0.00 Groundnut - RIL-4 - RIL-4_LG03 seq19D09 SSR 57.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 seq19D09 SSR 72.19 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG09 seq19D09 SSR 96.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG03 seq19D09 SSR 120.27 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - BC-1_b03 seq19D09 SSR 41.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG03 seq19D09 SSR 2.25 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-3_LG3 seq19D09 SSR 57.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 seq19D09 SSR 92.44 (cM) Automated name-based, Automated name-based View Maps
TC7E04 SSR 26.70 Groundnut - RIL-2 - RIL-2_LG09 TC7E04 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 TC7E04 SSR 31.75 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 TC7E04 SSR 74.70 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - BC-1_b03 TC7E04 SSR 40.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG03 TC7E04 SSR 12.52 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG03 TC7E04 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-3_LG3 TC7E04 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG03 TC7E04 SSR 88.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG03 TC7E04 SSR 190.72 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2060 SSR 51.50 Groundnut - Consensus_Abiotic - LG03 GM2060 SSR 214.66 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps