CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-2_LG11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-2 [ View Map Set Info ]
Map Name: RIL-2_LG11
Map Start: 0.00 cM
Map Stop: 147.30 cM
Features by Type:
8 SSR
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Groundnut - RIL-2 - RIL-2_LG11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1992 SSR 0.00 Groundnut - RIL-10 - RIL-10_LG23 GM1992 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG01 GM1992 SSR 34.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 GM1992 SSR 56.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM1992 SSR 86.25 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM1992 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 GM1992 SSR 4.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-10_LG1 GM1992 SSR 8.33 (cM) Automated name-based View Maps
GM2350 SSR 17.60 Groundnut - combined_corresponding_a01 - RIL-1_LG11 GM2350 SSR 22.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 GM2350 SSR 22.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM2350 SSR 17.60 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 GM2350 SSR 22.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM2350 SSR 21.37 (cM) Automated name-based, Automated name-based View Maps
GM2724a SSR 20.90 Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM2724a SSR 20.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM2724a SSR 24.67 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 GM2724a SSR 85.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM2724a SSR 15.98 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG01 GM2724a SSR 87.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM2724a SSR 87.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM2724a SSR 85.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 GM2724a SSR 25.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM2724a SSR 50.02 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2233b SSR 33.10 Groundnut - Ref. consensus genetic map - a01 GM2233b SSR 36.87 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM2233b SSR 33.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 GM2233b SSR 35.89 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Ah193 SSR 64.00 Groundnut - Ref. consensus genetic map - a01 Ah193 SSR 76.94 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 Ah193 SSR 64.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - BC-1_a01 Ah193 SSR 21.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-4_LG11 Ah193 SSR 26.70 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 Ah193 SSR 48.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 Ah193 SSR 48.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 Ah193 SSR 66.79 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
TC2D06 SSR 65.30 Groundnut - combined_corresponding_a01 - RIL-6_LG8 TC2D06 SSR 6.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 TC2D06 SSR 75.59 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG08 TC2D06 SSR 5.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 TC2D06 SSR 56.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-10_LG1 TC2D06 SSR 7.33 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 TC2D06 SSR 56.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 TC2D06 SSR 97.46 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG01 TC2D06 SSR 34.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG08 TC2D06 SSR 11.40 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 TC2D06 SSR 65.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-7_LG8 TC2D06 SSR 9.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - BC-1_a01 TC2D06 SSR 21.40 (cM) Automated name-based View Maps
S1 SSR 112.10 Groundnut - RIL-1 - RIL-1_LG11 S1 SSR 60.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 S1 SSR 112.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 S1 SSR 60.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 S1 SSR 108.04 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 S1 SSR 100.54 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2062 SSR 147.30 Groundnut - Consensus_Abiotic - LG11 GM2062 SSR 135.74 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM2062 SSR 147.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM2062 SSR 175.07 (cM) Automated name-based, Automated name-based View Maps