CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-2
(Reference Set)
Groundnut-Consensus_Biotic
Min.
Correspondences
Align Vertically
Stack
Maps RIL-2_LG03 LG03
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-2 [ View Map Set Info ]
Map Name: RIL-2_LG03
Map Start: 0.00 cM
Map Stop: 14.00 cM
Features by Type:
2 SSR
2 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 2 of 2.
Groundnut - RIL-2 - RIL-2_LG03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM745 SSR 0.00 Groundnut - RIL-4 - RIL-4_LG03 GM745 SSR 92.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 GM745 SSR 149.89 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG03 GM745 SSR 93.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-1_LG3 GM745 SSR 93.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG03 GM745 SSR 31.87 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-3_LG3 GM745 SSR 92.50 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG03 GM745 SSR 26.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG03 GM745 SSR 89.39 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
TC4G02 SSR 14.00 Groundnut - Ref. consensus genetic map - b03 TC4G02 SSR 240.41 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG13 TC4G02 SSR 127.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 TC4G02 SSR 249.39 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG03 TC4G02 SSR 172.12 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-10_LG13 TC4G02 SSR 39.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-3_LG3 TC4G02 SSR 70.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-5_LG15 TC4G02 SSR 27.10 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG03 TC4G02 SSR 70.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-4_LG15 TC4G02 SSR 39.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-9_LG3 TC4G02 SSR 99.40 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG15 TC4G02 SSR 29.48 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-1_LG3 TC4G02 SSR 166.30 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG03 TC4G02 SSR 166.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG13 TC4G02 SSR 36.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-9_LG13 TC4G02 SSR 26.80 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG15 TC4G02 SSR 27.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG15 TC4G02 SSR 39.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - BC-1_a03 TC4G02 SSR 7.00 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG03 TC4G02 SSR 106.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps