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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-3
(Reference Set)
Min.
Correspondences
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Maps RIL-3 _LG09
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-3 [ View Map Set Info ]
Map Name: RIL-3 _LG09
Map Start: 0.00 cM
Map Stop: 85.80 cM
Features by Type:
5 SSR
5 Total

Map Features

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Items 1 to 5 of 5.
Groundnut - RIL-3 - RIL-3 _LG09
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1922 SSR 0.00 Groundnut - Consensus_Abiotic - LG16 GM1922 SSR 31.86 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 GM1922 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1922 SSR 18.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1922 SSR 27.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 GM1922 SSR 7.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM1922 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG16 GM1922 SSR 7.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1922 SSR 167.42 (cM) Automated name-based, Automated name-based View Maps
GM2050 SSR 51.10 Groundnut - Ref. consensus genetic map - a07 GM2050 SSR 144.25 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM2050 SSR 51.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG16 GM2050 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
RN34A10 SSR 56.10 Groundnut - combined_corresponding_a07 - RIL-3_LG9 RN34A10 SSR 56.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 RN34A10 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 RN34A10 SSR 87.87 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG16 RN34A10 SSR 5.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 RN34A10 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
PM85 SSR 66.30 Groundnut - RIL-1 - RIL-1_LG16 PM85 SSR 24.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG16 PM85 SSR 15.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 PM85 SSR 66.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 PM85 SSR 24.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 PM85 SSR 131.08 (cM) Automated name-based, Automated name-based View Maps
GM1494 SSR 85.80 Groundnut - RIL-1 - RIL-1_LG16 GM1494 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-1_LG16 GM1494 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG07 GM1494 SSR 65.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG16 GM1494 SSR 38.96 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-3_LG9 GM1494 SSR 85.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-10_LG7 GM1494 SSR 19.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 GM1494 SSR 105.47 (cM) Automated name-based, Automated name-based View Maps