CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-5
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-5_LG01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-5 [ View Map Set Info ]
Map Name: RIL-5_LG01
Map Start: 0.00 cM
Map Stop: 87.10 cM
Features by Type:
10 SSR
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Groundnut - RIL-5 - RIL-5_LG01
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1565 SSR 0.00 Groundnut - RIL-4 - RIL-4_LG01 GM1565 SSR 21.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM1565 SSR 21.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM1565 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM1565 SSR 268.60 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM1565 SSR 5.67 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2308 SSR 5.50 Groundnut - Consensus_Abiotic - LG14 GM2308 SSR 44.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG14 GM2308 SSR 44.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b03 - RIL-1_LG14 GM2308 SSR 44.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM2308 SSR 5.50 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM2308 SSR 1.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM2308 SSR 268.51 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b03 GM2308 SSR 215.36 (cM) Automated name-based, Automated name-based View Maps
IPAHM287 SSR 20.90 Groundnut - combined_corresponding_a01 - RIL-9_LG26 IPAHM287 SSR 21.74 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 IPAHM287 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 IPAHM287 SSR 20.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-1_LG4 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG04 IPAHM287 SSR 0.00 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 IPAHM287 SSR 15.82 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 IPAHM287 SSR 150.74 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-9_LG15 IPAHM287 SSR 15.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 IPAHM287 SSR 26.13 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 IPAHM287 SSR 239.93 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG15 IPAHM287 SSR 24.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG04 IPAHM287 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - BC-1_a01 IPAHM287 SSR 52.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-2_LG4 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG26 IPAHM287 SSR 21.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1531 SSR 33.20 Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM1531 SSR 33.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM1531 SSR 16.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 GM1531 SSR 36.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM1531 SSR 36.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM1531 SSR 231.15 (cM) Automated name-based, Automated name-based View Maps
GM2233 SSR 41.90 Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM2233 SSR 41.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM2233 SSR 22.51 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM2233 SSR 131.93 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 GM2233 SSR 42.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM2233 SSR 42.80 (cM) Automated name-based View Maps
seq13A07 SSR 54.60 Groundnut - Ref. consensus genetic map - b01 seq13A07 SSR 72.98 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-1_LG1 seq13A07 SSR 37.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 seq13A07 SSR 26.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-6_LG15 seq13A07 SSR 34.40 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 seq13A07 SSR 46.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-7_LG15 seq13A07 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 seq13A07 SSR 28.61 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG01 seq13A07 SSR 37.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 seq13A07 SSR 46.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 seq13A07 SSR 54.60 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG01 seq13A07 SSR 101.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1090 SSR 61.50 Groundnut - RIL-4 - RIL-4_LG01 GM1090 SSR 59.60 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM1090 SSR 34.86 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM1090 SSR 59.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM1090 SSR 61.50 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM1090 SSR 65.98 (cM) Automated name-based, Automated name-based View Maps
GM1771 SSR 85.90 Groundnut - combined_corresponding_b01 - RIL-2_LG1 GM1771 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG01 GM1771 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM1771 SSR 85.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM1771 SSR 16.98 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG01 GM1771 SSR 164.21 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG01 GM1771 SSR 57.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-1_LG1 GM1771 SSR 57.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM1771 SSR 84.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM1771 SSR 48.17 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 GM1771 SSR 84.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1971a SSR 87.10 Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM1971a SSR 89.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM1971a SSR 87.10 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG01 GM1971a SSR 58.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-1_LG1 GM1971a SSR 58.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG01 GM1971a SSR 165.51 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM1971a SSR 52.91 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM1971a SSR 12.31 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 GM1971a SSR 89.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2724a SSR 87.10 Groundnut - RIL-4 - RIL-4_LG01 GM2724a SSR 85.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 GM2724a SSR 50.02 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 GM2724a SSR 87.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 GM2724a SSR 85.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM2724a SSR 24.67 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 GM2724a SSR 20.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 GM2724a SSR 15.98 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG11 GM2724a SSR 20.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 GM2724a SSR 25.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps